Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL1Q8WXF7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.44■□□□□ 0.7
ATL1Q8WXF7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL1Q8WXF7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.43■□□□□ 0.7
ATL1Q8WXF7 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 AC090192.1-201ENST00000517740 490 ntBASIC19.43■□□□□ 0.7
ATL1Q8WXF7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.43■□□□□ 0.7
ATL1Q8WXF7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.42■□□□□ 0.7
ATL1Q8WXF7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 AC091874.3-201ENST00000512672 1195 ntBASIC19.42■□□□□ 0.7
ATL1Q8WXF7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.42■□□□□ 0.7
ATL1Q8WXF7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATL1Q8WXF7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
ATL1Q8WXF7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.41■□□□□ 0.7
ATL1Q8WXF7 AL109923.1-201ENST00000618799 583 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms