Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 RPS2P52-201ENST00000469610 820 ntBASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 AC008687.6-201ENST00000596318 630 ntBASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZIC4Q8N9L1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 AC124283.5-201ENST00000624661 1809 ntBASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 AC026366.1-201ENST00000488803 879 ntBASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 AP003097.1-201ENST00000530657 1135 ntBASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.66■□□□□ 0.42
ZIC4Q8N9L1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ESRRAP1-201ENST00000400596 1257 ntBASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZIC4Q8N9L1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZIC4Q8N9L1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.64■□□□□ 0.42
ZIC4Q8N9L1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZIC4Q8N9L1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZIC4Q8N9L1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC4Q8N9L1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 POM121L13P-201ENST00000422362 380 ntBASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC4Q8N9L1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms