Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 AC124016.1-201ENST00000609552 612 ntBASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF39Q8N4T4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 AC142381.4-202ENST00000563973 229 ntBASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 AL121906.2-201ENST00000621597 723 ntBASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 AC116351.2-201ENST00000606540 1585 ntBASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF39Q8N4T4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF39Q8N4T4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF39Q8N4T4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF39Q8N4T4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.83■□□□□ 0.61
ARHGEF39Q8N4T4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF39Q8N4T4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 AC099778.1-201ENST00000568593 1911 ntBASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 C1QBPP2-201ENST00000528754 825 ntBASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 AL023875.1-201ENST00000640777 796 ntBASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF39Q8N4T4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF39Q8N4T4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms