Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 MKRN4P-201ENST00000444706 1521 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 KRT8P20-201ENST00000423953 1409 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 AC069152.1-201ENST00000438030 544 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 AC093787.1-201ENST00000450396 207 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 KRT18P6-201ENST00000555540 1265 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 AL031963.3-201ENST00000606441 850 ntBASIC18.35■□□□□ 0.53
ZNF550Q7Z398 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 PTBP1P-201ENST00000554374 1601 ntBASIC18.34■□□□□ 0.53
ZNF550Q7Z398 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 KRT16P6-202ENST00000425692 1426 ntBASIC18.34■□□□□ 0.53
ZNF550Q7Z398 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 TMEM179-206ENST00000616017 1645 ntBASIC18.34■□□□□ 0.53
ZNF550Q7Z398 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF550Q7Z398 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF550Q7Z398 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF550Q7Z398 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF550Q7Z398 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF550Q7Z398 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
ZNF550Q7Z398 HLA-G-202ENST00000376815 851 ntBASIC18.33■□□□□ 0.52
ZNF550Q7Z398 HLA-G-203ENST00000376818 1127 ntBASIC18.33■□□□□ 0.52
ZNF550Q7Z398 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 LSM12P1-201ENST00000411836 588 ntBASIC18.33■□□□□ 0.52
ZNF550Q7Z398 C2orf69P4-201ENST00000565394 541 ntBASIC18.33■□□□□ 0.52
ZNF550Q7Z398 AC133041.1-202ENST00000642053 222 ntBASIC18.33■□□□□ 0.52
ZNF550Q7Z398 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ZNF550Q7Z398 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.32■□□□□ 0.52
ZNF550Q7Z398 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TSPY20P-201ENST00000450910 630 ntBASIC18.32■□□□□ 0.52
ZNF550Q7Z398 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 AL691432.2-201ENST00000607222 2038 ntBASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF550Q7Z398 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF550Q7Z398 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms