Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 LSM12P1-201ENST00000411836 588 ntBASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 AC090192.1-201ENST00000517740 490 ntBASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 AC092118.2-201ENST00000613495 667 ntBASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 KRT8P17-201ENST00000453110 1448 ntBASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NHLRC1Q6VVB1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NHLRC1Q6VVB1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 AC023632.3-201ENST00000521633 145 ntBASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 AL691432.2-201ENST00000607222 2038 ntBASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NHLRC1Q6VVB1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NHLRC1Q6VVB1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms