Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBWD3Q5JTY5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBWD3Q5JTY5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 AC069152.1-201ENST00000438030 544 ntBASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 AC097658.1-201ENST00000475555 843 ntBASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CBWD3Q5JTY5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AL158211.5-201ENST00000623583 2518 ntBASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AC073210.2-201ENST00000430369 194 ntBASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AC005829.2-201ENST00000571422 1056 ntBASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CBWD3Q5JTY5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 AL355802.2-201ENST00000402069 882 ntBASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBWD3Q5JTY5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CBWD3Q5JTY5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.52■■□□□ 1.03
CBWD3Q5JTY5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms