Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH17Q12864 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH17Q12864 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH17Q12864 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDH17Q12864 BX276092.2-201ENST00000417668 665 ntBASIC20.14■□□□□ 0.81
CDH17Q12864 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CDH17Q12864 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH17Q12864 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH17Q12864 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDH17Q12864 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 AC006970.2-201ENST00000450065 779 ntBASIC20.13■□□□□ 0.81
CDH17Q12864 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 AL121832.2-201ENST00000610979 668 ntBASIC20.13■□□□□ 0.81
CDH17Q12864 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH17Q12864 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDH17Q12864 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH17Q12864 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH17Q12864 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH17Q12864 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH17Q12864 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDH17Q12864 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH17Q12864 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDH17Q12864 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH17Q12864 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH17Q12864 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH17Q12864 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.12■□□□□ 0.81
CDH17Q12864 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH17Q12864 AC009237.14-201ENST00000609975 1594 ntBASIC20.12■□□□□ 0.81
CDH17Q12864 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH17Q12864 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH17Q12864 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH17Q12864 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.11■□□□□ 0.81
CDH17Q12864 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH17Q12864 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDH17Q12864 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
CDH17Q12864 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH17Q12864 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH17Q12864 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH17Q12864 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH17Q12864 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH17Q12864 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 GPX1P1-201ENST00000388829 606 ntBASIC20.1■□□□□ 0.81
CDH17Q12864 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.1■□□□□ 0.81
CDH17Q12864 AC083906.2-201ENST00000511578 360 ntBASIC20.1■□□□□ 0.81
CDH17Q12864 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDH17Q12864 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH17Q12864 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH17Q12864 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH17Q12864 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH17Q12864 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH17Q12864 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms