Protein–RNA interactions for Protein: Q08962

NIP7, 60S ribosome subunit biogenesis protein NIP7, yeastyeast

Known RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP7Q08962 snR49snR49 165 nt-0.68□□□□□ -2.52
NIP7Q08962 YHR175W-AYHR175W-A 150 nt-0.69□□□□□ -2.52
NIP7Q08962 snR69snR69 101 nt-0.7□□□□□ -2.52
NIP7Q08962 YOR170WYOR170W 306 nt-0.7□□□□□ -2.52
NIP7Q08962 snR65snR65 100 nt-0.74□□□□□ -2.53
NIP7Q08962 YOL155W-AYOL155W-A 135 nt-0.74□□□□□ -2.53
NIP7Q08962 YGR146C-AYGR146C-A 162 nt-0.75□□□□□ -2.53
NIP7Q08962 snR39BsnR39B 96 nt-0.75□□□□□ -2.53
NIP7Q08962 snR56snR56 88 nt-0.78□□□□□ -2.53
NIP7Q08962 YNL097C-BYNL097C-B 123 nt-0.79□□□□□ -2.54
NIP7Q08962 RDS3YPR094W 324 nt-0.79□□□□□ -2.54
NIP7Q08962 snR33snR33 183 nt-0.79□□□□□ -2.54
NIP7Q08962 PMP2YEL017C-A 132 nt-0.8□□□□□ -2.54
NIP7Q08962 YER090C-AYER090C-A 90 nt-0.8□□□□□ -2.54
NIP7Q08962 tR(ACG)Q2tR(ACG)Q2 74 nt-0.8□□□□□ -2.54
NIP7Q08962 YPL152W-AYPL152W-A 99 nt-0.8□□□□□ -2.54
NIP7Q08962 tT(UGU)G1tT(UGU)G1 72 nt-0.83□□□□□ -2.54
NIP7Q08962 tT(UGU)G2tT(UGU)G2 72 nt-0.83□□□□□ -2.54
NIP7Q08962 tT(UGU)PtT(UGU)P 72 nt-0.83□□□□□ -2.54
NIP7Q08962 YOR329W-AYOR329W-A 210 nt-0.83□□□□□ -2.54
NIP7Q08962 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
NIP7Q08962 YNL266WYNL266W 420 nt-0.85□□□□□ -2.55
NIP7Q08962 snR50snR50 90 nt-0.85□□□□□ -2.55
NIP7Q08962 YOR302WYOR302W 78 nt-0.86□□□□□ -2.55
NIP7Q08962 YGL188C-AYGL188C-A 141 nt-0.91□□□□□ -2.56
NIP7Q08962 tD(GUC)QtD(GUC)Q 75 nt-0.94□□□□□ -2.56
NIP7Q08962 snR48snR48 113 nt-0.95□□□□□ -2.56
NIP7Q08962 JLP2YMR132C 627 nt-0.96□□□□□ -2.56
NIP7Q08962 YNL205CYNL205C 423 nt-0.97□□□□□ -2.56
NIP7Q08962 snR67snR67 82 nt-0.98□□□□□ -2.57
NIP7Q08962 YLR342W-AYLR342W-A 174 nt-0.98□□□□□ -2.57
NIP7Q08962 snR52snR52 92 nt-0.98□□□□□ -2.57
NIP7Q08962 YDR524W-CYDR524W-C 90 nt-0.99□□□□□ -2.57
NIP7Q08962 YLR286W-AYLR286W-A 135 nt-0.99□□□□□ -2.57
NIP7Q08962 YOR231C-AYOR231C-A 201 nt-0.99□□□□□ -2.57
NIP7Q08962 snR161snR161 161 nt-1□□□□□ -2.57
NIP7Q08962 YBR178WYBR178W 375 nt-1□□□□□ -2.57
NIP7Q08962 YOR102WYOR102W 351 nt-1.04□□□□□ -2.58
NIP7Q08962 YDL159C-BYDL159C-B 177 nt-1.05□□□□□ -2.58
NIP7Q08962 tL(UAA)QtL(UAA)Q 85 nt-1.05□□□□□ -2.58
NIP7Q08962 SKI7YOR076C 2244 nt-1.06□□□□□ -2.58
NIP7Q08962 snR80snR80 171 nt-1.08□□□□□ -2.58
NIP7Q08962 YHL015W-AYHL015W-A 84 nt-1.09□□□□□ -2.58
NIP7Q08962 tP(UGG)QtP(UGG)Q 72 nt-1.12□□□□□ -2.59
NIP7Q08962 YBR223W-AYBR223W-A 120 nt-1.16□□□□□ -2.6
NIP7Q08962 YLR299C-AYLR299C-A 93 nt-1.19□□□□□ -2.6
NIP7Q08962 YDR406W-AYDR406W-A 246 nt-1.21□□□□□ -2.6
NIP7Q08962 YBR196C-AYBR196C-A 150 nt-1.21□□□□□ -2.6
NIP7Q08962 YML054C-AYML054C-A 159 nt-1.25□□□□□ -2.61
NIP7Q08962 YNL198CYNL198C 303 nt-1.32□□□□□ -2.62
NIP7Q08962 CDC65tQ(CUG)M 72 nt-1.35□□□□□ -2.63
NIP7Q08962 YNR077CYNR077C 255 nt-1.37□□□□□ -2.63
NIP7Q08962 snR77snR77 88 nt-1.38□□□□□ -2.63
NIP7Q08962 YGR240C-AYGR240C-A 201 nt-1.39□□□□□ -2.63
NIP7Q08962 SOM1YEL059C-A 225 nt-1.41□□□□□ -2.64
NIP7Q08962 YJL150WYJL150W 303 nt-1.42□□□□□ -2.64
NIP7Q08962 YHR180C-BYHR180C-B 105 nt-1.44□□□□□ -2.64
NIP7Q08962 YBL053WYBL053W 375 nt-1.46□□□□□ -2.64
NIP7Q08962 YOR376W-AYOR376W-A 156 nt-1.46□□□□□ -2.64
NIP7Q08962 YCR095W-AYCR095W-A 159 nt-1.48□□□□□ -2.65
NIP7Q08962 tY(GUA)QtY(GUA)Q 84 nt-1.49□□□□□ -2.65
NIP7Q08962 YMR046W-AYMR046W-A 129 nt-1.5□□□□□ -2.65
NIP7Q08962 YMR315W-AYMR315W-A 108 nt-1.53□□□□□ -2.65
NIP7Q08962 snR81snR81 201 nt-1.56□□□□□ -2.66
NIP7Q08962 Q0142Q0142 177 nt-1.56□□□□□ -2.66
NIP7Q08962 SPG3YDR504C 384 nt-1.63□□□□□ -2.67
NIP7Q08962 YOR316C-AYOR316C-A 210 nt-1.65□□□□□ -2.67
NIP7Q08962 YKL106C-AYKL106C-A 120 nt-1.66□□□□□ -2.68
NIP7Q08962 tM(CAU)Q1tM(CAU)Q1 76 nt-1.72□□□□□ -2.68
NIP7Q08962 YBR109W-AYBR109W-A 225 nt-1.73□□□□□ -2.69
NIP7Q08962 YBR296C-AYBR296C-A 120 nt-1.73□□□□□ -2.69
NIP7Q08962 RPL41AYDL184C 78 nt-1.74□□□□□ -2.69
NIP7Q08962 YGR151CYGR151C 336 nt-1.74□□□□□ -2.69
NIP7Q08962 YOL083C-AYOL083C-A 141 nt-1.77□□□□□ -2.69
NIP7Q08962 YOR309CYOR309C 381 nt-1.82□□□□□ -2.7
NIP7Q08962 snR38snR38 95 nt-1.82□□□□□ -2.7
NIP7Q08962 YBL071C-BYBL071C-B 99 nt-1.83□□□□□ -2.7
NIP7Q08962 YLR466C-BYLR466C-B 117 nt-1.84□□□□□ -2.7
NIP7Q08962 YCL001W-BYCL001W-B 255 nt-1.84□□□□□ -2.7
NIP7Q08962 YOL164W-AYOL164W-A 183 nt-1.87□□□□□ -2.71
NIP7Q08962 YAL037C-AYAL037C-A 93 nt-1.91□□□□□ -2.72
NIP7Q08962 YNL338WYNL338W 159 nt-1.95□□□□□ -2.72
NIP7Q08962 YBL100W-CYBL100W-C 120 nt-1.96□□□□□ -2.72
NIP7Q08962 snR47snR47 99 nt-1.97□□□□□ -2.72
NIP7Q08962 snR6snR6 112 nt-2.04□□□□□ -2.74
NIP7Q08962 YBR126W-BYBR126W-B 144 nt-2.07□□□□□ -2.74
NIP7Q08962 YNL337WYNL337W 255 nt-2.09□□□□□ -2.74
NIP7Q08962 YOR335W-AYOR335W-A 81 nt-2.15□□□□□ -2.75
NIP7Q08962 snR73snR73 106 nt-2.2□□□□□ -2.76
NIP7Q08962 tS(GCU)Q1tS(GCU)Q1 86 nt-2.2□□□□□ -2.76
NIP7Q08962 YKL225WYKL225W 348 nt-2.21□□□□□ -2.76
NIP7Q08962 RPL41BYDL133C-A 78 nt-2.25□□□□□ -2.77
NIP7Q08962 Q0032Q0032 291 nt-2.28□□□□□ -2.77
NIP7Q08962 tV(UAC)QtV(UAC)Q 76 nt-2.28□□□□□ -2.77
NIP7Q08962 YDL114W-AYDL114W-A 114 nt-2.29□□□□□ -2.78
NIP7Q08962 YGL041C-BYGL041C-B 183 nt-2.35□□□□□ -2.79
NIP7Q08962 snR85snR85 171 nt-2.41□□□□□ -2.8
NIP7Q08962 YGL007C-AYGL007C-A 87 nt-2.42□□□□□ -2.8
NIP7Q08962 snR61snR61 90 nt-2.43□□□□□ -2.8
NIP7Q08962 YNL103W-AYNL103W-A 90 nt-2.44□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 303.2 ms