Protein–RNA interactions for Protein: Q07500

NDE2, External NADH-ubiquinone oxidoreductase 2, mitochondrial, yeastyeast

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE2Q07500 YNL054W-BYNL054W-B 5250 nt0.39□□□□□ -2.35
NDE2Q07500 YBL100W-BYBL100W-B 5313 nt0.39□□□□□ -2.35
NDE2Q07500 YDR210WYDR210W 228 nt0.39□□□□□ -2.35
NDE2Q07500 YOR225WYOR225W 330 nt0.39□□□□□ -2.35
NDE2Q07500 IQG1YPL242C 4488 nt0.38□□□□□ -2.35
NDE2Q07500 AI1Q0050 2505 nt0.37□□□□□ -2.35
NDE2Q07500 YOR102WYOR102W 351 nt0.37□□□□□ -2.35
NDE2Q07500 YHL015W-AYHL015W-A 84 nt0.36□□□□□ -2.35
NDE2Q07500 QCR9YGR183C 201 nt0.35□□□□□ -2.35
NDE2Q07500 YDL007C-AYDL007C-A 258 nt0.34□□□□□ -2.36
NDE2Q07500 CSE1YGL238W 2883 nt0.33□□□□□ -2.36
NDE2Q07500 Q0032Q0032 291 nt0.32□□□□□ -2.36
NDE2Q07500 tM(CAU)Q2tM(CAU)Q2 78 nt0.32□□□□□ -2.36
NDE2Q07500 YOL014WYOL014W 375 nt0.29□□□□□ -2.36
NDE2Q07500 MLP1YKR095W 5628 nt0.29□□□□□ -2.36
NDE2Q07500 YNL067W-BYNL067W-B 141 nt0.28□□□□□ -2.36
NDE2Q07500 YGR146C-AYGR146C-A 162 nt0.26□□□□□ -2.37
NDE2Q07500 YBR099CYBR099C 384 nt0.26□□□□□ -2.37
NDE2Q07500 SOV1YMR066W 2697 nt0.26□□□□□ -2.37
NDE2Q07500 YLR294CYLR294C 330 nt0.24□□□□□ -2.37
NDE2Q07500 RPM2YML091C 3609 nt0.22□□□□□ -2.37
NDE2Q07500 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
NDE2Q07500 EST1YLR233C 2100 nt0.21□□□□□ -2.38
NDE2Q07500 YIL071W-AYIL071W-A 477 nt0.18□□□□□ -2.38
NDE2Q07500 MLP2YIL149C 5040 nt0.17□□□□□ -2.38
NDE2Q07500 snR69snR69 101 nt0.16□□□□□ -2.38
NDE2Q07500 YOR186C-AYOR186C-A 210 nt0.16□□□□□ -2.38
NDE2Q07500 PMP2YEL017C-A 132 nt0.15□□□□□ -2.39
NDE2Q07500 YNL205CYNL205C 423 nt0.13□□□□□ -2.39
NDE2Q07500 YCL001W-BYCL001W-B 255 nt0.11□□□□□ -2.39
NDE2Q07500 YGR164WYGR164W 336 nt0.1□□□□□ -2.39
NDE2Q07500 SEC10YLR166C 2616 nt0.09□□□□□ -2.39
NDE2Q07500 SOM1YEL059C-A 225 nt0.09□□□□□ -2.4
NDE2Q07500 YER078W-AYER078W-A 165 nt0.07□□□□□ -2.4
NDE2Q07500 tQ(UUG)QtQ(UUG)Q 76 nt0.06□□□□□ -2.4
NDE2Q07500 YJL077W-AYJL077W-A 87 nt0.06□□□□□ -2.4
NDE2Q07500 YBR178WYBR178W 375 nt0.06□□□□□ -2.4
NDE2Q07500 tD(GUC)QtD(GUC)Q 75 nt0.05□□□□□ -2.4
NDE2Q07500 YNL266WYNL266W 420 nt0.05□□□□□ -2.4
NDE2Q07500 RDS3YPR094W 324 nt0.05□□□□□ -2.4
NDE2Q07500 YCR095W-AYCR095W-A 159 nt0.04□□□□□ -2.4
NDE2Q07500 snR128snR128 126 nt0.01□□□□□ -2.41
NDE2Q07500 snR50snR50 90 nt0□□□□□ -2.41
NDE2Q07500 YER090C-AYER090C-A 90 nt-0.02□□□□□ -2.41
NDE2Q07500 YLR286W-AYLR286W-A 135 nt-0.02□□□□□ -2.41
NDE2Q07500 YNL170WYNL170W 396 nt-0.04□□□□□ -2.42
NDE2Q07500 YBR196C-AYBR196C-A 150 nt-0.05□□□□□ -2.42
NDE2Q07500 YDL159C-BYDL159C-B 177 nt-0.06□□□□□ -2.42
NDE2Q07500 ATP8Q0080 147 nt-0.07□□□□□ -2.42
NDE2Q07500 YML100W-AYML100W-A 174 nt-0.07□□□□□ -2.42
NDE2Q07500 snR45snR45 172 nt-0.07□□□□□ -2.42
NDE2Q07500 YLR299C-AYLR299C-A 93 nt-0.13□□□□□ -2.43
NDE2Q07500 Q0092Q0092 141 nt-0.18□□□□□ -2.44
NDE2Q07500 SBH2YER019C-A 267 nt-0.19□□□□□ -2.44
NDE2Q07500 YOL083C-AYOL083C-A 141 nt-0.22□□□□□ -2.44
NDE2Q07500 snR67snR67 82 nt-0.23□□□□□ -2.45
NDE2Q07500 YML054C-AYML054C-A 159 nt-0.23□□□□□ -2.45
NDE2Q07500 YNL103W-AYNL103W-A 90 nt-0.23□□□□□ -2.45
NDE2Q07500 YBL071C-BYBL071C-B 99 nt-0.23□□□□□ -2.45
NDE2Q07500 snR81snR81 201 nt-0.25□□□□□ -2.45
NDE2Q07500 SKI7YOR076C 2244 nt-0.26□□□□□ -2.45
NDE2Q07500 TFB5YDR079C-A 219 nt-0.27□□□□□ -2.45
NDE2Q07500 PAU9YBL108C-A 129 nt-0.27□□□□□ -2.45
NDE2Q07500 tA(UGC)QtA(UGC)Q 76 nt-0.29□□□□□ -2.46
NDE2Q07500 YAL037C-AYAL037C-A 93 nt-0.3□□□□□ -2.46
NDE2Q07500 YOL164W-AYOL164W-A 183 nt-0.33□□□□□ -2.46
NDE2Q07500 YHR180C-BYHR180C-B 105 nt-0.34□□□□□ -2.46
NDE2Q07500 YGL041C-BYGL041C-B 183 nt-0.35□□□□□ -2.47
NDE2Q07500 snR61snR61 90 nt-0.37□□□□□ -2.47
NDE2Q07500 YJL113WYJL113W 4647 nt-0.4□□□□□ -2.47
NDE2Q07500 Q0143Q0143 153 nt-0.4□□□□□ -2.47
NDE2Q07500 YBR109W-AYBR109W-A 225 nt-0.4□□□□□ -2.47
NDE2Q07500 snR38snR38 95 nt-0.44□□□□□ -2.48
NDE2Q07500 snR47snR47 99 nt-0.44□□□□□ -2.48
NDE2Q07500 YGR240C-AYGR240C-A 201 nt-0.47□□□□□ -2.48
NDE2Q07500 RPL41AYDL184C 78 nt-0.49□□□□□ -2.49
NDE2Q07500 tS(GCU)Q1tS(GCU)Q1 86 nt-0.51□□□□□ -2.49
NDE2Q07500 YBR296C-AYBR296C-A 120 nt-0.51□□□□□ -2.49
NDE2Q07500 URB1YKL014C 5295 nt-0.52□□□□□ -2.49
NDE2Q07500 YBL100W-CYBL100W-C 120 nt-0.54□□□□□ -2.5
NDE2Q07500 YOR376W-AYOR376W-A 156 nt-0.57□□□□□ -2.5
NDE2Q07500 snR161snR161 161 nt-0.58□□□□□ -2.5
NDE2Q07500 snR85snR85 171 nt-0.61□□□□□ -2.51
NDE2Q07500 snR62snR62 100 nt-0.64□□□□□ -2.51
NDE2Q07500 YDR034C-AYDR034C-A 177 nt-0.64□□□□□ -2.51
NDE2Q07500 YKL106C-AYKL106C-A 120 nt-0.66□□□□□ -2.52
NDE2Q07500 YKL225WYKL225W 348 nt-0.66□□□□□ -2.52
NDE2Q07500 YBL109WYBL109W 336 nt-0.66□□□□□ -2.52
NDE2Q07500 YMR326CYMR326C 309 nt-0.67□□□□□ -2.52
NDE2Q07500 YHR217CYHR217C 462 nt-0.7□□□□□ -2.52
NDE2Q07500 snR33snR33 183 nt-0.7□□□□□ -2.52
NDE2Q07500 YOR316C-AYOR316C-A 210 nt-0.76□□□□□ -2.53
NDE2Q07500 YHL009W-BYHL009W-B 5409 nt-0.79□□□□□ -2.54
NDE2Q07500 snR77snR77 88 nt-0.79□□□□□ -2.54
NDE2Q07500 tP(UGG)QtP(UGG)Q 72 nt-0.86□□□□□ -2.55
NDE2Q07500 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
NDE2Q07500 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
NDE2Q07500 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
NDE2Q07500 YLL066W-BYLL066W-B 171 nt-0.86□□□□□ -2.55
NDE2Q07500 YDL159W-AYDL159W-A 132 nt-0.87□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 7.1 ms