Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 RPS26AYGL189C 360 nt0.77□□□□□ -2.29
GFD1Q04839 YMR326CYMR326C 309 nt0.77□□□□□ -2.29
GFD1Q04839 SEC10YLR166C 2616 nt0.77□□□□□ -2.29
GFD1Q04839 UTP20YBL004W 7482 nt0.76□□□□□ -2.29
GFD1Q04839 CSE1YGL238W 2883 nt0.76□□□□□ -2.29
GFD1Q04839 snR81snR81 201 nt0.75□□□□□ -2.29
GFD1Q04839 YDR371C-AYDR371C-A 105 nt0.75□□□□□ -2.29
GFD1Q04839 PAU12YGR294W 363 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
GFD1Q04839 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
GFD1Q04839 YHR217CYHR217C 462 nt0.75□□□□□ -2.29
GFD1Q04839 EST1YLR233C 2100 nt0.74□□□□□ -2.29
GFD1Q04839 tF(GAA)BtF(GAA)B 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)FtF(GAA)F 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)GtF(GAA)G 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)H1tF(GAA)H1 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)H2tF(GAA)H2 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)MtF(GAA)M 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)P1tF(GAA)P1 73 nt0.73□□□□□ -2.29
GFD1Q04839 tF(GAA)P2tF(GAA)P2 73 nt0.73□□□□□ -2.29
GFD1Q04839 ORC3YLL004W 1851 nt0.72□□□□□ -2.29
GFD1Q04839 snR69snR69 101 nt0.72□□□□□ -2.29
GFD1Q04839 PET111YMR257C 2403 nt0.71□□□□□ -2.3
GFD1Q04839 YBR196C-AYBR196C-A 150 nt0.7□□□□□ -2.3
GFD1Q04839 SBH1YER087C-B 249 nt0.69□□□□□ -2.3
GFD1Q04839 YPR159C-AYPR159C-A 102 nt0.68□□□□□ -2.3
GFD1Q04839 tD(GUC)QtD(GUC)Q 75 nt0.67□□□□□ -2.3
GFD1Q04839 YAL037C-AYAL037C-A 93 nt0.67□□□□□ -2.3
GFD1Q04839 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
GFD1Q04839 YMR160WYMR160W 2451 nt0.66□□□□□ -2.3
GFD1Q04839 YBL071C-BYBL071C-B 99 nt0.66□□□□□ -2.3
GFD1Q04839 YLR286W-AYLR286W-A 135 nt0.65□□□□□ -2.31
GFD1Q04839 YOL083C-AYOL083C-A 141 nt0.65□□□□□ -2.31
GFD1Q04839 YBL100W-BYBL100W-B 5313 nt0.65□□□□□ -2.31
GFD1Q04839 tS(GCU)Q1tS(GCU)Q1 86 nt0.62□□□□□ -2.31
GFD1Q04839 YKL145W-AYKL145W-A 93 nt0.61□□□□□ -2.31
GFD1Q04839 RDS3YPR094W 324 nt0.6□□□□□ -2.31
GFD1Q04839 UTP10YJL109C 5310 nt0.59□□□□□ -2.31
GFD1Q04839 YOL014WYOL014W 375 nt0.59□□□□□ -2.31
GFD1Q04839 YJL077W-AYJL077W-A 87 nt0.57□□□□□ -2.32
GFD1Q04839 YDL159C-BYDL159C-B 177 nt0.55□□□□□ -2.32
GFD1Q04839 YLR299C-AYLR299C-A 93 nt0.52□□□□□ -2.33
GFD1Q04839 YOL164W-AYOL164W-A 183 nt0.51□□□□□ -2.33
GFD1Q04839 tQ(UUG)QtQ(UUG)Q 76 nt0.5□□□□□ -2.33
GFD1Q04839 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
GFD1Q04839 IQG1YPL242C 4488 nt0.48□□□□□ -2.33
GFD1Q04839 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
GFD1Q04839 YDL247W-AYDL247W-A 75 nt0.47□□□□□ -2.33
GFD1Q04839 MLP1YKR095W 5628 nt0.46□□□□□ -2.34
GFD1Q04839 snR50snR50 90 nt0.46□□□□□ -2.34
GFD1Q04839 YER090C-AYER090C-A 90 nt0.45□□□□□ -2.34
GFD1Q04839 snR62snR62 100 nt0.44□□□□□ -2.34
GFD1Q04839 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
GFD1Q04839 YGR240C-AYGR240C-A 201 nt0.41□□□□□ -2.34
GFD1Q04839 YML054C-AYML054C-A 159 nt0.41□□□□□ -2.34
GFD1Q04839 snR45snR45 172 nt0.41□□□□□ -2.34
GFD1Q04839 AI1Q0050 2505 nt0.4□□□□□ -2.34
GFD1Q04839 YLL066W-BYLL066W-B 171 nt0.39□□□□□ -2.35
GFD1Q04839 snR47snR47 99 nt0.39□□□□□ -2.35
GFD1Q04839 YOR186C-AYOR186C-A 210 nt0.37□□□□□ -2.35
GFD1Q04839 YBL100W-CYBL100W-C 120 nt0.35□□□□□ -2.35
GFD1Q04839 YDR034C-AYDR034C-A 177 nt0.34□□□□□ -2.36
GFD1Q04839 MLP2YIL149C 5040 nt0.32□□□□□ -2.36
GFD1Q04839 YBR109W-AYBR109W-A 225 nt0.31□□□□□ -2.36
GFD1Q04839 YHR180C-BYHR180C-B 105 nt0.3□□□□□ -2.36
GFD1Q04839 THO2YNL139C 4794 nt0.29□□□□□ -2.36
GFD1Q04839 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
GFD1Q04839 snR38snR38 95 nt0.27□□□□□ -2.37
GFD1Q04839 snR67snR67 82 nt0.24□□□□□ -2.37
GFD1Q04839 YML100W-AYML100W-A 174 nt0.24□□□□□ -2.37
GFD1Q04839 YER078W-AYER078W-A 165 nt0.23□□□□□ -2.37
GFD1Q04839 RPL41AYDL184C 78 nt0.19□□□□□ -2.38
GFD1Q04839 YBR296C-AYBR296C-A 120 nt0.19□□□□□ -2.38
GFD1Q04839 YKL225WYKL225W 348 nt0.16□□□□□ -2.38
GFD1Q04839 SKI7YOR076C 2244 nt0.15□□□□□ -2.38
GFD1Q04839 snR128snR128 126 nt0.14□□□□□ -2.39
GFD1Q04839 snR64snR64 101 nt0.06□□□□□ -2.4
GFD1Q04839 snR53snR53 91 nt-0.06□□□□□ -2.42
GFD1Q04839 YDL159W-AYDL159W-A 132 nt-0.07□□□□□ -2.42
GFD1Q04839 PAU9YBL108C-A 129 nt-0.07□□□□□ -2.42
GFD1Q04839 tA(UGC)QtA(UGC)Q 76 nt-0.1□□□□□ -2.43
GFD1Q04839 YKL106C-AYKL106C-A 120 nt-0.13□□□□□ -2.43
GFD1Q04839 YOR376W-AYOR376W-A 156 nt-0.13□□□□□ -2.43
GFD1Q04839 YGR122C-AYGR122C-A 129 nt-0.21□□□□□ -2.44
GFD1Q04839 SBH2YER019C-A 267 nt-0.22□□□□□ -2.44
GFD1Q04839 YJL113WYJL113W 4647 nt-0.27□□□□□ -2.45
GFD1Q04839 YOR316C-AYOR316C-A 210 nt-0.3□□□□□ -2.46
GFD1Q04839 YLR149C-AYLR149C-A 87 nt-0.35□□□□□ -2.47
GFD1Q04839 snR161snR161 161 nt-0.36□□□□□ -2.47
GFD1Q04839 tV(UAC)QtV(UAC)Q 76 nt-0.37□□□□□ -2.47
GFD1Q04839 YDL114W-AYDL114W-A 114 nt-0.39□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms