Protein–RNA interactions for Protein: Q04602

VBA4, Vacuolar basic amino acid transporter 4, yeastyeast

Known RBP Predictions only

Length 768 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA4Q04602 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
VBA4Q04602 YIL142C-AYIL142C-A 333 nt0.72□□□□□ -2.29
VBA4Q04602 EST1YLR233C 2100 nt0.7□□□□□ -2.3
VBA4Q04602 snR69snR69 101 nt0.7□□□□□ -2.3
VBA4Q04602 ORC3YLL004W 1851 nt0.69□□□□□ -2.3
VBA4Q04602 MYO1YHR023W 5787 nt0.68□□□□□ -2.3
VBA4Q04602 YBL109WYBL109W 336 nt0.68□□□□□ -2.3
VBA4Q04602 YBR196C-AYBR196C-A 150 nt0.67□□□□□ -2.3
VBA4Q04602 YGL041C-BYGL041C-B 183 nt0.66□□□□□ -2.3
VBA4Q04602 YMR326CYMR326C 309 nt0.66□□□□□ -2.3
VBA4Q04602 tD(GUC)QtD(GUC)Q 75 nt0.65□□□□□ -2.31
VBA4Q04602 YDR524C-AYDR524C-A 120 nt0.63□□□□□ -2.31
VBA4Q04602 SBH1YER087C-B 249 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)BtT(AGU)B 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)CtT(AGU)C 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)DtT(AGU)D 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)HtT(AGU)H 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)I1tT(AGU)I1 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)I2tT(AGU)I2 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)JtT(AGU)J 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)N1tT(AGU)N1 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)N2tT(AGU)N2 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)O1tT(AGU)O1 73 nt0.63□□□□□ -2.31
VBA4Q04602 tT(AGU)O2tT(AGU)O2 73 nt0.63□□□□□ -2.31
VBA4Q04602 YJL077W-AYJL077W-A 87 nt0.63□□□□□ -2.31
VBA4Q04602 YBL100W-BYBL100W-B 5313 nt0.63□□□□□ -2.31
VBA4Q04602 MLP1YKR095W 5628 nt0.62□□□□□ -2.31
VBA4Q04602 snR81snR81 201 nt0.61□□□□□ -2.31
VBA4Q04602 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
VBA4Q04602 YAL037C-AYAL037C-A 93 nt0.6□□□□□ -2.31
VBA4Q04602 RDS3YPR094W 324 nt0.6□□□□□ -2.31
VBA4Q04602 YMR160WYMR160W 2451 nt0.6□□□□□ -2.31
VBA4Q04602 YHR217CYHR217C 462 nt0.59□□□□□ -2.31
VBA4Q04602 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
VBA4Q04602 UTP20YBL004W 7482 nt0.59□□□□□ -2.32
VBA4Q04602 YNL054W-BYNL054W-B 5250 nt0.58□□□□□ -2.32
VBA4Q04602 YLR286W-AYLR286W-A 135 nt0.58□□□□□ -2.32
VBA4Q04602 IQG1YPL242C 4488 nt0.55□□□□□ -2.32
VBA4Q04602 YOL083C-AYOL083C-A 141 nt0.53□□□□□ -2.32
VBA4Q04602 YDL159C-BYDL159C-B 177 nt0.52□□□□□ -2.33
VBA4Q04602 YBL071C-BYBL071C-B 99 nt0.52□□□□□ -2.33
VBA4Q04602 tF(GAA)BtF(GAA)B 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)FtF(GAA)F 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)GtF(GAA)G 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)H1tF(GAA)H1 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)H2tF(GAA)H2 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)MtF(GAA)M 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)P1tF(GAA)P1 73 nt0.51□□□□□ -2.33
VBA4Q04602 tF(GAA)P2tF(GAA)P2 73 nt0.51□□□□□ -2.33
VBA4Q04602 tQ(UUG)QtQ(UUG)Q 76 nt0.5□□□□□ -2.33
VBA4Q04602 YLR299C-AYLR299C-A 93 nt0.49□□□□□ -2.33
VBA4Q04602 ESP1YGR098C 4893 nt0.48□□□□□ -2.33
VBA4Q04602 YOR186C-AYOR186C-A 210 nt0.47□□□□□ -2.33
VBA4Q04602 MLP2YIL149C 5040 nt0.45□□□□□ -2.34
VBA4Q04602 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
VBA4Q04602 YER090C-AYER090C-A 90 nt0.43□□□□□ -2.34
VBA4Q04602 tS(GCU)Q1tS(GCU)Q1 86 nt0.43□□□□□ -2.34
VBA4Q04602 YKL145W-AYKL145W-A 93 nt0.42□□□□□ -2.34
VBA4Q04602 YOL164W-AYOL164W-A 183 nt0.41□□□□□ -2.34
VBA4Q04602 snR50snR50 90 nt0.38□□□□□ -2.35
VBA4Q04602 SOV1YMR066W 2697 nt0.37□□□□□ -2.35
VBA4Q04602 YOL014WYOL014W 375 nt0.35□□□□□ -2.35
VBA4Q04602 AI1Q0050 2505 nt0.34□□□□□ -2.36
VBA4Q04602 YBL100W-CYBL100W-C 120 nt0.32□□□□□ -2.36
VBA4Q04602 snR62snR62 100 nt0.31□□□□□ -2.36
VBA4Q04602 YDL247W-AYDL247W-A 75 nt0.31□□□□□ -2.36
VBA4Q04602 YML054C-AYML054C-A 159 nt0.31□□□□□ -2.36
VBA4Q04602 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
VBA4Q04602 YGR240C-AYGR240C-A 201 nt0.3□□□□□ -2.36
VBA4Q04602 YHR180C-BYHR180C-B 105 nt0.25□□□□□ -2.37
VBA4Q04602 snR47snR47 99 nt0.25□□□□□ -2.37
VBA4Q04602 snR67snR67 82 nt0.22□□□□□ -2.37
VBA4Q04602 YML100W-AYML100W-A 174 nt0.21□□□□□ -2.38
VBA4Q04602 YDR034C-AYDR034C-A 177 nt0.19□□□□□ -2.38
VBA4Q04602 YLL066W-BYLL066W-B 171 nt0.19□□□□□ -2.38
VBA4Q04602 snR45snR45 172 nt0.19□□□□□ -2.38
VBA4Q04602 THO2YNL139C 4794 nt0.19□□□□□ -2.38
VBA4Q04602 YBR109W-AYBR109W-A 225 nt0.18□□□□□ -2.38
VBA4Q04602 snR128snR128 126 nt0.16□□□□□ -2.38
VBA4Q04602 RPL41AYDL184C 78 nt0.12□□□□□ -2.39
VBA4Q04602 YBR296C-AYBR296C-A 120 nt0.12□□□□□ -2.39
VBA4Q04602 YER078W-AYER078W-A 165 nt0.11□□□□□ -2.39
VBA4Q04602 snR38snR38 95 nt0.09□□□□□ -2.4
VBA4Q04602 SKI7YOR076C 2244 nt0.03□□□□□ -2.4
VBA4Q04602 YKL225WYKL225W 348 nt0.01□□□□□ -2.41
VBA4Q04602 snR64snR64 101 nt-0.1□□□□□ -2.43
VBA4Q04602 PAU9YBL108C-A 129 nt-0.1□□□□□ -2.43
VBA4Q04602 tA(UGC)QtA(UGC)Q 76 nt-0.14□□□□□ -2.43
VBA4Q04602 SBH2YER019C-A 267 nt-0.2□□□□□ -2.44
VBA4Q04602 YKL106C-AYKL106C-A 120 nt-0.22□□□□□ -2.44
VBA4Q04602 snR53snR53 91 nt-0.25□□□□□ -2.45
VBA4Q04602 YJL113WYJL113W 4647 nt-0.25□□□□□ -2.45
VBA4Q04602 YOR376W-AYOR376W-A 156 nt-0.28□□□□□ -2.45
VBA4Q04602 YDL159W-AYDL159W-A 132 nt-0.31□□□□□ -2.46
VBA4Q04602 YOR316C-AYOR316C-A 210 nt-0.39□□□□□ -2.47
VBA4Q04602 YGR122C-AYGR122C-A 129 nt-0.4□□□□□ -2.47
VBA4Q04602 snR161snR161 161 nt-0.44□□□□□ -2.48
VBA4Q04602 YHL009W-BYHL009W-B 5409 nt-0.45□□□□□ -2.48
VBA4Q04602 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
VBA4Q04602 YDL114W-AYDL114W-A 114 nt-0.55□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms