Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 YSP1YHR155W 3687 nt0.9□□□□□ -2.27
NUP53Q03790 GLG1YKR058W 1851 nt0.89□□□□□ -2.27
NUP53Q03790 YOR192C-BYOR192C-B 5313 nt0.89□□□□□ -2.27
NUP53Q03790 YDR034C-AYDR034C-A 177 nt0.89□□□□□ -2.27
NUP53Q03790 ORC3YLL004W 1851 nt0.88□□□□□ -2.27
NUP53Q03790 tD(GUC)QtD(GUC)Q 75 nt0.87□□□□□ -2.27
NUP53Q03790 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
NUP53Q03790 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
NUP53Q03790 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
NUP53Q03790 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
NUP53Q03790 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
NUP53Q03790 YLL006W-AYLL006W-A 177 nt0.87□□□□□ -2.27
NUP53Q03790 CSE1YGL238W 2883 nt0.86□□□□□ -2.27
NUP53Q03790 RPM2YML091C 3609 nt0.86□□□□□ -2.27
NUP53Q03790 ULP2YIL031W 3105 nt0.86□□□□□ -2.27
NUP53Q03790 YGR240C-AYGR240C-A 201 nt0.86□□□□□ -2.27
NUP53Q03790 snR47snR47 99 nt0.86□□□□□ -2.27
NUP53Q03790 snR69snR69 101 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)BtF(GAA)B 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)FtF(GAA)F 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)GtF(GAA)G 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)H1tF(GAA)H1 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)H2tF(GAA)H2 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)MtF(GAA)M 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)P1tF(GAA)P1 73 nt0.85□□□□□ -2.27
NUP53Q03790 tF(GAA)P2tF(GAA)P2 73 nt0.85□□□□□ -2.27
NUP53Q03790 YPR117WYPR117W 7470 nt0.85□□□□□ -2.27
NUP53Q03790 NIP1YMR309C 2439 nt0.84□□□□□ -2.28
NUP53Q03790 SCC2YDR180W 4482 nt0.82□□□□□ -2.28
NUP53Q03790 BEM2YER155C 6504 nt0.82□□□□□ -2.28
NUP53Q03790 YPL060C-AYPL060C-A 3315 nt0.82□□□□□ -2.28
NUP53Q03790 DOP1YDR141C 5097 nt0.82□□□□□ -2.28
NUP53Q03790 BUL2YML111W 2763 nt0.79□□□□□ -2.28
NUP53Q03790 YDL159C-BYDL159C-B 177 nt0.79□□□□□ -2.28
NUP53Q03790 YLR299C-AYLR299C-A 93 nt0.79□□□□□ -2.28
NUP53Q03790 YBL100W-CYBL100W-C 120 nt0.79□□□□□ -2.28
NUP53Q03790 RDS3YPR094W 324 nt0.75□□□□□ -2.29
NUP53Q03790 YML054C-AYML054C-A 159 nt0.73□□□□□ -2.29
NUP53Q03790 YDR371C-AYDR371C-A 105 nt0.72□□□□□ -2.29
NUP53Q03790 YOL014WYOL014W 375 nt0.72□□□□□ -2.29
NUP53Q03790 LTE1YAL024C 4308 nt0.72□□□□□ -2.29
NUP53Q03790 tQ(UUG)QtQ(UUG)Q 76 nt0.71□□□□□ -2.3
NUP53Q03790 YMR160WYMR160W 2451 nt0.7□□□□□ -2.3
NUP53Q03790 YKL145W-AYKL145W-A 93 nt0.69□□□□□ -2.3
NUP53Q03790 YBR109W-AYBR109W-A 225 nt0.67□□□□□ -2.3
NUP53Q03790 snR50snR50 90 nt0.67□□□□□ -2.3
NUP53Q03790 UTP20YBL004W 7482 nt0.67□□□□□ -2.3
NUP53Q03790 YHR180C-BYHR180C-B 105 nt0.66□□□□□ -2.3
NUP53Q03790 PET111YMR257C 2403 nt0.65□□□□□ -2.31
NUP53Q03790 snR64snR64 101 nt0.65□□□□□ -2.31
NUP53Q03790 YJL077W-AYJL077W-A 87 nt0.65□□□□□ -2.31
NUP53Q03790 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
NUP53Q03790 snR38snR38 95 nt0.65□□□□□ -2.31
NUP53Q03790 YKL225WYKL225W 348 nt0.64□□□□□ -2.31
NUP53Q03790 MLP2YIL149C 5040 nt0.63□□□□□ -2.31
NUP53Q03790 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
NUP53Q03790 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
NUP53Q03790 RPL41AYDL184C 78 nt0.6□□□□□ -2.31
NUP53Q03790 YER090C-AYER090C-A 90 nt0.6□□□□□ -2.31
NUP53Q03790 snR53snR53 91 nt0.6□□□□□ -2.31
NUP53Q03790 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
NUP53Q03790 THO2YNL139C 4794 nt0.58□□□□□ -2.32
NUP53Q03790 YBL100W-BYBL100W-B 5313 nt0.57□□□□□ -2.32
NUP53Q03790 AI1Q0050 2505 nt0.57□□□□□ -2.32
NUP53Q03790 YMR272W-AYMR272W-A 114 nt0.56□□□□□ -2.32
NUP53Q03790 YBR296C-AYBR296C-A 120 nt0.56□□□□□ -2.32
NUP53Q03790 YDL159W-AYDL159W-A 132 nt0.55□□□□□ -2.32
NUP53Q03790 IQG1YPL242C 4488 nt0.54□□□□□ -2.32
NUP53Q03790 snR67snR67 82 nt0.45□□□□□ -2.34
NUP53Q03790 SKI7YOR076C 2244 nt0.43□□□□□ -2.34
NUP53Q03790 YGR122C-AYGR122C-A 129 nt0.39□□□□□ -2.35
NUP53Q03790 MLP1YKR095W 5628 nt0.39□□□□□ -2.35
NUP53Q03790 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
NUP53Q03790 SOV1YMR066W 2697 nt0.36□□□□□ -2.35
NUP53Q03790 YLR149C-AYLR149C-A 87 nt0.36□□□□□ -2.35
NUP53Q03790 YOR186C-AYOR186C-A 210 nt0.35□□□□□ -2.35
NUP53Q03790 YML100W-AYML100W-A 174 nt0.33□□□□□ -2.36
NUP53Q03790 YER078W-AYER078W-A 165 nt0.32□□□□□ -2.36
NUP53Q03790 ESP1YGR098C 4893 nt0.3□□□□□ -2.36
NUP53Q03790 YKL106C-AYKL106C-A 120 nt0.25□□□□□ -2.37
NUP53Q03790 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
NUP53Q03790 snR128snR128 126 nt0.22□□□□□ -2.37
NUP53Q03790 YOR376W-AYOR376W-A 156 nt0.2□□□□□ -2.38
NUP53Q03790 YKL096C-BYKL096C-B 150 nt0.17□□□□□ -2.38
NUP53Q03790 PAU9YBL108C-A 129 nt0.17□□□□□ -2.38
NUP53Q03790 YDL114W-AYDL114W-A 114 nt0.14□□□□□ -2.39
NUP53Q03790 tV(UAC)QtV(UAC)Q 76 nt0.12□□□□□ -2.39
NUP53Q03790 YOR316C-AYOR316C-A 210 nt0.04□□□□□ -2.4
NUP53Q03790 tA(UGC)QtA(UGC)Q 76 nt0.02□□□□□ -2.41
NUP53Q03790 snR75snR75 89 nt0.01□□□□□ -2.41
NUP53Q03790 snR77snR77 88 nt0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms