Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.93■□□□□ 0.62
RAE1P78406 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RAE1P78406 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 MIPEPP3-201ENST00000412105 444 ntBASIC18.93■□□□□ 0.62
RAE1P78406 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.93■□□□□ 0.62
RAE1P78406 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.93■□□□□ 0.62
RAE1P78406 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RAE1P78406 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RAE1P78406 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RAE1P78406 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAE1P78406 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.93■□□□□ 0.62
RAE1P78406 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.92■□□□□ 0.62
RAE1P78406 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.92■□□□□ 0.62
RAE1P78406 GUSBP6-202ENST00000438529 1198 ntBASIC18.92■□□□□ 0.62
RAE1P78406 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.92■□□□□ 0.62
RAE1P78406 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.92■□□□□ 0.62
RAE1P78406 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.92■□□□□ 0.62
RAE1P78406 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.92■□□□□ 0.62
RAE1P78406 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
RAE1P78406 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.92■□□□□ 0.62
RAE1P78406 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.92■□□□□ 0.62
RAE1P78406 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAE1P78406 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.92■□□□□ 0.62
RAE1P78406 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAE1P78406 AC116562.4-201ENST00000641316 2276 ntBASIC18.91■□□□□ 0.62
RAE1P78406 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 AC006970.2-201ENST00000450065 779 ntBASIC18.91■□□□□ 0.62
RAE1P78406 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.91■□□□□ 0.62
RAE1P78406 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAE1P78406 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
RAE1P78406 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RAE1P78406 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.9■□□□□ 0.62
RAE1P78406 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.9■□□□□ 0.62
RAE1P78406 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAE1P78406 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.9■□□□□ 0.62
RAE1P78406 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms