Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.67■□□□□ 0.74
SRP54P61011 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SRP54P61011 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.67■□□□□ 0.74
SRP54P61011 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.67■□□□□ 0.74
SRP54P61011 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.67■□□□□ 0.74
SRP54P61011 MIR4497-201ENST00000583208 89 ntBASIC19.67■□□□□ 0.74
SRP54P61011 AL121906.2-201ENST00000621597 723 ntBASIC19.67■□□□□ 0.74
SRP54P61011 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 KRT8P17-201ENST00000453110 1448 ntBASIC19.67■□□□□ 0.74
SRP54P61011 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SRP54P61011 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.67■□□□□ 0.74
SRP54P61011 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.67■□□□□ 0.74
SRP54P61011 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP54P61011 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
SRP54P61011 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
SRP54P61011 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 RPS2P55-201ENST00000397318 883 ntBASIC19.66■□□□□ 0.74
SRP54P61011 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRP54P61011 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.66■□□□□ 0.74
SRP54P61011 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 AC012618.2-201ENST00000428058 849 ntBASIC19.66■□□□□ 0.74
SRP54P61011 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 AC107956.1-201ENST00000494359 873 ntBASIC19.66■□□□□ 0.74
SRP54P61011 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.66■□□□□ 0.74
SRP54P61011 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRP54P61011 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.66■□□□□ 0.74
SRP54P61011 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.66■□□□□ 0.74
SRP54P61011 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.66■□□□□ 0.74
SRP54P61011 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.66■□□□□ 0.74
SRP54P61011 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP54P61011 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRP54P61011 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
SRP54P61011 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRP54P61011 SNORA78-201ENST00000459373 127 ntBASIC19.65■□□□□ 0.74
SRP54P61011 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.65■□□□□ 0.74
SRP54P61011 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.65■□□□□ 0.74
SRP54P61011 AC233702.5-201ENST00000584107 538 ntBASIC19.65■□□□□ 0.74
SRP54P61011 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.65■□□□□ 0.74
SRP54P61011 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 DPP3P2-201ENST00000416030 1696 ntBASIC19.65■□□□□ 0.74
SRP54P61011 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP54P61011 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRP54P61011 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SRP54P61011 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SRP54P61011 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.64■□□□□ 0.73
SRP54P61011 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.64■□□□□ 0.73
SRP54P61011 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 AL135905.2-201ENST00000584934 1404 ntBASIC19.64■□□□□ 0.73
SRP54P61011 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.64■□□□□ 0.73
SRP54P61011 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
SRP54P61011 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.64■□□□□ 0.73
SRP54P61011 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SRP54P61011 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SRP54P61011 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP54P61011 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.63■□□□□ 0.73
SRP54P61011 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.63■□□□□ 0.73
SRP54P61011 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRP54P61011 AC092720.2-201ENST00000602388 1665 ntBASIC19.63■□□□□ 0.73
SRP54P61011 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.63■□□□□ 0.73
SRP54P61011 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms