Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.6■■□□□ 1.69
EIF4A1P60842 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
EIF4A1P60842 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.6■■□□□ 1.69
EIF4A1P60842 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
EIF4A1P60842 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
EIF4A1P60842 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.6■■□□□ 1.69
EIF4A1P60842 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.6■■□□□ 1.69
EIF4A1P60842 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
EIF4A1P60842 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
EIF4A1P60842 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.59■■□□□ 1.69
EIF4A1P60842 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.59■■□□□ 1.69
EIF4A1P60842 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.59■■□□□ 1.69
EIF4A1P60842 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.59■■□□□ 1.69
EIF4A1P60842 AC004264.1-201ENST00000608354 794 ntBASIC25.59■■□□□ 1.69
EIF4A1P60842 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
EIF4A1P60842 KRT17P2-201ENST00000300992 1314 ntBASIC25.59■■□□□ 1.69
EIF4A1P60842 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.58■■□□□ 1.69
EIF4A1P60842 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
EIF4A1P60842 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
EIF4A1P60842 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.58■■□□□ 1.69
EIF4A1P60842 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.58■■□□□ 1.69
EIF4A1P60842 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.58■■□□□ 1.69
EIF4A1P60842 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.58■■□□□ 1.69
EIF4A1P60842 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.58■■□□□ 1.69
EIF4A1P60842 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
EIF4A1P60842 AC018553.1-201ENST00000616682 1458 ntBASIC25.58■■□□□ 1.69
EIF4A1P60842 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
EIF4A1P60842 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.57■■□□□ 1.68
EIF4A1P60842 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.57■■□□□ 1.68
EIF4A1P60842 MIR4785-201ENST00000585005 73 ntBASIC25.57■■□□□ 1.68
EIF4A1P60842 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EIF4A1P60842 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.57■■□□□ 1.68
EIF4A1P60842 AC073912.3-201ENST00000624414 853 ntBASIC25.57■■□□□ 1.68
EIF4A1P60842 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.57■■□□□ 1.68
EIF4A1P60842 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
EIF4A1P60842 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.57■■□□□ 1.68
EIF4A1P60842 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EIF4A1P60842 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EIF4A1P60842 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.56■■□□□ 1.68
EIF4A1P60842 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
EIF4A1P60842 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.56■■□□□ 1.68
EIF4A1P60842 BX088651.1-201ENST00000540551 451 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.56■■□□□ 1.68
EIF4A1P60842 AL355075.4-201ENST00000554988 638 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.56■■□□□ 1.68
EIF4A1P60842 CD177P1-201ENST00000606252 935 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 AL353708.3-201ENST00000610272 989 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.56■■□□□ 1.68
EIF4A1P60842 AC020907.5-201ENST00000624372 1936 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 AC073314.1-201ENST00000568729 2216 ntBASIC25.56■■□□□ 1.68
EIF4A1P60842 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
EIF4A1P60842 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF4A1P60842 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
EIF4A1P60842 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.56■■□□□ 1.68
EIF4A1P60842 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
EIF4A1P60842 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
EIF4A1P60842 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 AL353807.1-201ENST00000427475 662 ntBASIC25.55■■□□□ 1.68
EIF4A1P60842 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.55■■□□□ 1.68
EIF4A1P60842 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
EIF4A1P60842 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.55■■□□□ 1.68
EIF4A1P60842 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EIF4A1P60842 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
EIF4A1P60842 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
EIF4A1P60842 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
EIF4A1P60842 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
EIF4A1P60842 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EIF4A1P60842 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.54■■□□□ 1.68
EIF4A1P60842 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.54■■□□□ 1.68
EIF4A1P60842 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
EIF4A1P60842 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
EIF4A1P60842 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
EIF4A1P60842 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EIF4A1P60842 FAM197Y1-201ENST00000421178 764 ntBASIC25.54■■□□□ 1.68
EIF4A1P60842 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.54■■□□□ 1.68
EIF4A1P60842 AC073195.1-201ENST00000607241 877 ntBASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms