Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GTF2A1P52655 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2A1P52655 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GTF2A1P52655 PKD1P1-201ENST00000458669 6805 ntBASIC19.54■□□□□ 0.72
GTF2A1P52655 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
GTF2A1P52655 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2A1P52655 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2A1P52655 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2A1P52655 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2A1P52655 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2A1P52655 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.53■□□□□ 0.72
GTF2A1P52655 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.53■□□□□ 0.72
GTF2A1P52655 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GTF2A1P52655 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF2A1P52655 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GTF2A1P52655 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.52■□□□□ 0.72
GTF2A1P52655 C17orf82-201ENST00000623772 1530 ntBASIC19.52■□□□□ 0.72
GTF2A1P52655 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.52■□□□□ 0.72
GTF2A1P52655 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GTF2A1P52655 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GTF2A1P52655 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
GTF2A1P52655 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GTF2A1P52655 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.52■□□□□ 0.72
GTF2A1P52655 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.52■□□□□ 0.72
GTF2A1P52655 PCDHA12-202ENST00000613593 2588 ntBASIC19.52■□□□□ 0.72
GTF2A1P52655 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF2A1P52655 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF2A1P52655 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GTF2A1P52655 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
GTF2A1P52655 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
GTF2A1P52655 Z82202.1-201ENST00000623446 1880 ntBASIC19.52■□□□□ 0.71
GTF2A1P52655 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
GTF2A1P52655 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF2A1P52655 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF2A1P52655 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GTF2A1P52655 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GTF2A1P52655 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF2A1P52655 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF2A1P52655 THA1P-201ENST00000590384 1145 ntBASIC19.51■□□□□ 0.71
GTF2A1P52655 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.51■□□□□ 0.71
GTF2A1P52655 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF2A1P52655 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF2A1P52655 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF2A1P52655 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF2A1P52655 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms