Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 PTBP1P-201ENST00000554374 1601 ntBASIC19.3■□□□□ 0.68
KRT6CP48668 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT6CP48668 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT6CP48668 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.3■□□□□ 0.68
KRT6CP48668 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT6CP48668 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT6CP48668 KRT8P17-201ENST00000453110 1448 ntBASIC19.3■□□□□ 0.68
KRT6CP48668 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT6CP48668 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT6CP48668 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT6CP48668 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
KRT6CP48668 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT6CP48668 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT6CP48668 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT6CP48668 OR10C1-204ENST00000622521 1039 ntBASIC19.29■□□□□ 0.68
KRT6CP48668 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT6CP48668 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT6CP48668 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT6CP48668 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KRT6CP48668 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KRT6CP48668 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
KRT6CP48668 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 KRT16P6-202ENST00000425692 1426 ntBASIC19.28■□□□□ 0.68
KRT6CP48668 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT6CP48668 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT6CP48668 AL031963.3-201ENST00000606441 850 ntBASIC19.28■□□□□ 0.68
KRT6CP48668 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT6CP48668 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT6CP48668 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT6CP48668 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
KRT6CP48668 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT6CP48668 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT6CP48668 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
KRT6CP48668 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
KRT6CP48668 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT6CP48668 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT6CP48668 KRT8P20-201ENST00000423953 1409 ntBASIC19.27■□□□□ 0.68
KRT6CP48668 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
KRT6CP48668 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.27■□□□□ 0.68
KRT6CP48668 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT6CP48668 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
KRT6CP48668 AL589743.5-201ENST00000616611 1050 ntBASIC19.27■□□□□ 0.68
KRT6CP48668 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT6CP48668 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT6CP48668 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT6CP48668 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT6CP48668 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT6CP48668 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT6CP48668 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT6CP48668 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT6CP48668 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KRT6CP48668 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT6CP48668 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT6CP48668 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT6CP48668 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.26■□□□□ 0.67
KRT6CP48668 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.26■□□□□ 0.67
KRT6CP48668 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.26■□□□□ 0.67
KRT6CP48668 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms