Protein–RNA interactions for Protein: P47161

VPS70, Vacuolar protein sorting-associated protein 70, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS70P47161 YBR296C-AYBR296C-A 120 nt1.74□□□□□ -2.13
VPS70P47161 YDR371C-AYDR371C-A 105 nt1.72□□□□□ -2.13
VPS70P47161 LTE1YAL024C 4308 nt1.72□□□□□ -2.13
VPS70P47161 SPC110YDR356W 2835 nt1.71□□□□□ -2.14
VPS70P47161 MLP2YIL149C 5040 nt1.71□□□□□ -2.14
VPS70P47161 FYV8YGR196C 2454 nt1.71□□□□□ -2.14
VPS70P47161 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
VPS70P47161 tQ(UUG)QtQ(UUG)Q 76 nt1.64□□□□□ -2.15
VPS70P47161 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
VPS70P47161 YNL054W-BYNL054W-B 5250 nt1.62□□□□□ -2.15
VPS70P47161 FIG2YCR089W 4830 nt1.61□□□□□ -2.15
VPS70P47161 YNL284C-BYNL284C-B 5268 nt1.6□□□□□ -2.15
VPS70P47161 YPR117WYPR117W 7470 nt1.6□□□□□ -2.15
VPS70P47161 snR38snR38 95 nt1.6□□□□□ -2.15
VPS70P47161 AI1Q0050 2505 nt1.59□□□□□ -2.16
VPS70P47161 SCC2YDR180W 4482 nt1.58□□□□□ -2.16
VPS70P47161 YER090C-AYER090C-A 90 nt1.56□□□□□ -2.16
VPS70P47161 CCH1YGR217W 6120 nt1.54□□□□□ -2.16
VPS70P47161 HKR1YDR420W 5409 nt1.53□□□□□ -2.17
VPS70P47161 SKI7YOR076C 2244 nt1.52□□□□□ -2.17
VPS70P47161 YLR149C-AYLR149C-A 87 nt1.52□□□□□ -2.17
VPS70P47161 YKL096C-BYKL096C-B 150 nt1.51□□□□□ -2.17
VPS70P47161 SSK2YNR031C 4740 nt1.51□□□□□ -2.17
VPS70P47161 tQ(UUG)E2tQ(UUG)E2 72 nt1.5□□□□□ -2.17
VPS70P47161 IQG1YPL242C 4488 nt1.45□□□□□ -2.18
VPS70P47161 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
VPS70P47161 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
VPS70P47161 VAM6YDL077C 3150 nt1.41□□□□□ -2.18
VPS70P47161 RKR1YMR247C 4689 nt1.41□□□□□ -2.18
VPS70P47161 YDL159W-AYDL159W-A 132 nt1.4□□□□□ -2.19
VPS70P47161 YOR192C-BYOR192C-B 5313 nt1.39□□□□□ -2.19
VPS70P47161 PET111YMR257C 2403 nt1.39□□□□□ -2.19
VPS70P47161 YJR029WYJR029W 5268 nt1.38□□□□□ -2.19
VPS70P47161 MLP1YKR095W 5628 nt1.37□□□□□ -2.19
VPS70P47161 IML1YJR138W 4755 nt1.37□□□□□ -2.19
VPS70P47161 YGR122C-AYGR122C-A 129 nt1.36□□□□□ -2.19
VPS70P47161 DOP1YDR141C 5097 nt1.36□□□□□ -2.19
VPS70P47161 BUD3YCL014W 4911 nt1.35□□□□□ -2.19
VPS70P47161 BEM2YER155C 6504 nt1.35□□□□□ -2.19
VPS70P47161 snR67snR67 82 nt1.34□□□□□ -2.19
VPS70P47161 MYO1YHR023W 5787 nt1.29□□□□□ -2.2
VPS70P47161 YBL100W-BYBL100W-B 5313 nt1.29□□□□□ -2.2
VPS70P47161 PAU24YBR301W 363 nt1.28□□□□□ -2.2
VPS70P47161 YPR137C-BYPR137C-B 5268 nt1.28□□□□□ -2.2
VPS70P47161 tV(UAC)BtV(UAC)B 74 nt1.26□□□□□ -2.21
VPS70P47161 tV(UAC)DtV(UAC)D 74 nt1.26□□□□□ -2.21
VPS70P47161 snR75snR75 89 nt1.19□□□□□ -2.22
VPS70P47161 YMR160WYMR160W 2451 nt1.13□□□□□ -2.23
VPS70P47161 YER078W-AYER078W-A 165 nt1.12□□□□□ -2.23
VPS70P47161 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
VPS70P47161 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
VPS70P47161 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
VPS70P47161 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
VPS70P47161 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
VPS70P47161 YOR186C-AYOR186C-A 210 nt1.08□□□□□ -2.24
VPS70P47161 UTP20YBL004W 7482 nt1.03□□□□□ -2.24
VPS70P47161 YKL106C-AYKL106C-A 120 nt0.99□□□□□ -2.25
VPS70P47161 ESP1YGR098C 4893 nt0.94□□□□□ -2.26
VPS70P47161 YPR159C-AYPR159C-A 102 nt0.93□□□□□ -2.26
VPS70P47161 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
VPS70P47161 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
VPS70P47161 YML100W-AYML100W-A 174 nt0.91□□□□□ -2.26
VPS70P47161 YDL114W-AYDL114W-A 114 nt0.86□□□□□ -2.27
VPS70P47161 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
VPS70P47161 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
VPS70P47161 tV(UAC)QtV(UAC)Q 76 nt0.77□□□□□ -2.29
VPS70P47161 YOL014WYOL014W 375 nt0.75□□□□□ -2.29
VPS70P47161 SOV1YMR066W 2697 nt0.75□□□□□ -2.29
VPS70P47161 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
VPS70P47161 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
VPS70P47161 THO2YNL139C 4794 nt0.67□□□□□ -2.3
VPS70P47161 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
VPS70P47161 YOR316C-AYOR316C-A 210 nt0.63□□□□□ -2.31
VPS70P47161 YOR376W-AYOR376W-A 156 nt0.63□□□□□ -2.31
VPS70P47161 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
VPS70P47161 snR128snR128 126 nt0.55□□□□□ -2.32
VPS70P47161 YOL013W-AYOL013W-A 192 nt0.53□□□□□ -2.32
VPS70P47161 YJL113WYJL113W 4647 nt0.52□□□□□ -2.33
VPS70P47161 SBH2YER019C-A 267 nt0.51□□□□□ -2.33
VPS70P47161 snR77snR77 88 nt0.47□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 112 ms