Protein–RNA interactions for Protein: P47064

APS3, AP-3 complex subunit sigma, yeastyeast

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APS3P47064 Q0017Q0017 162 nt-1.18□□□□□ -2.6
APS3P47064 YDR157WYDR157W 402 nt-1.19□□□□□ -2.6
APS3P47064 tF(GAA)QtF(GAA)Q 75 nt-1.19□□□□□ -2.6
APS3P47064 YGR146C-AYGR146C-A 162 nt-1.2□□□□□ -2.6
APS3P47064 YOR008C-AYOR008C-A 225 nt-1.21□□□□□ -2.6
APS3P47064 SKI7YOR076C 2244 nt-1.22□□□□□ -2.6
APS3P47064 snR67snR67 82 nt-1.23□□□□□ -2.61
APS3P47064 YOR329W-AYOR329W-A 210 nt-1.24□□□□□ -2.61
APS3P47064 YLR222C-AYLR222C-A 231 nt-1.25□□□□□ -2.61
APS3P47064 YDR413CYDR413C 576 nt-1.26□□□□□ -2.61
APS3P47064 tD(GUC)QtD(GUC)Q 75 nt-1.27□□□□□ -2.61
APS3P47064 YBR178WYBR178W 375 nt-1.27□□□□□ -2.61
APS3P47064 YDR118W-AYDR118W-A 117 nt-1.28□□□□□ -2.61
APS3P47064 YER181CYER181C 324 nt-1.29□□□□□ -2.62
APS3P47064 YLR286W-AYLR286W-A 135 nt-1.29□□□□□ -2.62
APS3P47064 YNL277W-AYNL277W-A 189 nt-1.3□□□□□ -2.62
APS3P47064 YDL240C-AYDL240C-A 138 nt-1.32□□□□□ -2.62
APS3P47064 RPL39YJL189W 156 nt-1.32□□□□□ -2.62
APS3P47064 YNL097C-BYNL097C-B 123 nt-1.34□□□□□ -2.62
APS3P47064 YKL118WYKL118W 312 nt-1.35□□□□□ -2.63
APS3P47064 YNR077CYNR077C 255 nt-1.35□□□□□ -2.63
APS3P47064 YDL159C-BYDL159C-B 177 nt-1.36□□□□□ -2.63
APS3P47064 YBR223W-AYBR223W-A 120 nt-1.36□□□□□ -2.63
APS3P47064 snR55snR55 98 nt-1.37□□□□□ -2.63
APS3P47064 VAR1Q0140 1197 nt-1.39□□□□□ -2.63
APS3P47064 YML054C-AYML054C-A 159 nt-1.41□□□□□ -2.64
APS3P47064 YNL205CYNL205C 423 nt-1.43□□□□□ -2.64
APS3P47064 YOR302WYOR302W 78 nt-1.45□□□□□ -2.64
APS3P47064 snR77snR77 88 nt-1.47□□□□□ -2.64
APS3P47064 CDC65tQ(CUG)M 72 nt-1.47□□□□□ -2.64
APS3P47064 GIM4YEL003W 336 nt-1.49□□□□□ -2.65
APS3P47064 tL(UAA)QtL(UAA)Q 85 nt-1.5□□□□□ -2.65
APS3P47064 YPR012WYPR012W 255 nt-1.5□□□□□ -2.65
APS3P47064 snR48snR48 113 nt-1.5□□□□□ -2.65
APS3P47064 YGL188C-AYGL188C-A 141 nt-1.52□□□□□ -2.65
APS3P47064 YOL155W-AYOL155W-A 135 nt-1.52□□□□□ -2.65
APS3P47064 tY(GUA)QtY(GUA)Q 84 nt-1.53□□□□□ -2.65
APS3P47064 YLR299C-AYLR299C-A 93 nt-1.53□□□□□ -2.65
APS3P47064 snR52snR52 92 nt-1.53□□□□□ -2.65
APS3P47064 YGR240C-AYGR240C-A 201 nt-1.54□□□□□ -2.66
APS3P47064 YOR102WYOR102W 351 nt-1.54□□□□□ -2.66
APS3P47064 YMR315W-AYMR315W-A 108 nt-1.59□□□□□ -2.66
APS3P47064 YPL152W-AYPL152W-A 99 nt-1.6□□□□□ -2.67
APS3P47064 YBR196C-AYBR196C-A 150 nt-1.6□□□□□ -2.67
APS3P47064 snR81snR81 201 nt-1.61□□□□□ -2.67
APS3P47064 YHL015W-AYHL015W-A 84 nt-1.64□□□□□ -2.67
APS3P47064 YLR342W-AYLR342W-A 174 nt-1.64□□□□□ -2.67
APS3P47064 YOR376W-AYOR376W-A 156 nt-1.64□□□□□ -2.67
APS3P47064 snR65snR65 100 nt-1.68□□□□□ -2.68
APS3P47064 YHR180C-BYHR180C-B 105 nt-1.73□□□□□ -2.69
APS3P47064 snR80snR80 171 nt-1.77□□□□□ -2.69
APS3P47064 Q0144Q0144 330 nt-1.78□□□□□ -2.69
APS3P47064 YNL198CYNL198C 303 nt-1.83□□□□□ -2.7
APS3P47064 YJL150WYJL150W 303 nt-1.86□□□□□ -2.71
APS3P47064 YKL106C-AYKL106C-A 120 nt-1.87□□□□□ -2.71
APS3P47064 YHR175W-AYHR175W-A 150 nt-1.88□□□□□ -2.71
APS3P47064 YOR316C-AYOR316C-A 210 nt-1.88□□□□□ -2.71
APS3P47064 YBL053WYBL053W 375 nt-1.89□□□□□ -2.71
APS3P47064 YOR231C-AYOR231C-A 201 nt-1.9□□□□□ -2.71
APS3P47064 YOR309CYOR309C 381 nt-1.92□□□□□ -2.72
APS3P47064 SOM1YEL059C-A 225 nt-1.93□□□□□ -2.72
APS3P47064 YDR406W-AYDR406W-A 246 nt-1.97□□□□□ -2.72
APS3P47064 tR(ACG)Q2tR(ACG)Q2 74 nt-1.97□□□□□ -2.72
APS3P47064 YBR109W-AYBR109W-A 225 nt-2.01□□□□□ -2.73
APS3P47064 snR56snR56 88 nt-2.03□□□□□ -2.73
APS3P47064 RPL41AYDL184C 78 nt-2.04□□□□□ -2.74
APS3P47064 YBR296C-AYBR296C-A 120 nt-2.07□□□□□ -2.74
APS3P47064 YCR095W-AYCR095W-A 159 nt-2.09□□□□□ -2.74
APS3P47064 snR38snR38 95 nt-2.09□□□□□ -2.74
APS3P47064 YOL083C-AYOL083C-A 141 nt-2.13□□□□□ -2.75
APS3P47064 YBL071C-BYBL071C-B 99 nt-2.17□□□□□ -2.76
APS3P47064 YDR524W-CYDR524W-C 90 nt-2.19□□□□□ -2.76
APS3P47064 YGR151CYGR151C 336 nt-2.19□□□□□ -2.76
APS3P47064 snR6snR6 112 nt-2.21□□□□□ -2.76
APS3P47064 YBR126W-BYBR126W-B 144 nt-2.22□□□□□ -2.76
APS3P47064 YOL164W-AYOL164W-A 183 nt-2.24□□□□□ -2.77
APS3P47064 snR47snR47 99 nt-2.29□□□□□ -2.78
APS3P47064 YOR335W-AYOR335W-A 81 nt-2.34□□□□□ -2.78
APS3P47064 snR73snR73 106 nt-2.39□□□□□ -2.79
APS3P47064 RPL41BYDL133C-A 78 nt-2.39□□□□□ -2.79
APS3P47064 YAL037C-AYAL037C-A 93 nt-2.41□□□□□ -2.8
APS3P47064 YCL001W-BYCL001W-B 255 nt-2.41□□□□□ -2.8
APS3P47064 YBL100W-CYBL100W-C 120 nt-2.42□□□□□ -2.8
APS3P47064 YMR046W-AYMR046W-A 129 nt-2.45□□□□□ -2.8
APS3P47064 SPG3YDR504C 384 nt-2.47□□□□□ -2.8
APS3P47064 tS(GCU)Q1tS(GCU)Q1 86 nt-2.52□□□□□ -2.81
APS3P47064 YKL225WYKL225W 348 nt-2.56□□□□□ -2.82
APS3P47064 tV(UAC)QtV(UAC)Q 76 nt-2.57□□□□□ -2.82
APS3P47064 YDL114W-AYDL114W-A 114 nt-2.58□□□□□ -2.82
APS3P47064 YLR466C-BYLR466C-B 117 nt-2.63□□□□□ -2.83
APS3P47064 snR85snR85 171 nt-2.66□□□□□ -2.84
APS3P47064 YNL337WYNL337W 255 nt-2.67□□□□□ -2.84
APS3P47064 YNL338WYNL338W 159 nt-2.68□□□□□ -2.84
APS3P47064 tM(CAU)Q1tM(CAU)Q1 76 nt-2.76□□□□□ -2.85
APS3P47064 YDR524C-AYDR524C-A 120 nt-2.81□□□□□ -2.86
APS3P47064 YDL159W-AYDL159W-A 132 nt-2.83□□□□□ -2.86
APS3P47064 YDR034C-AYDR034C-A 177 nt-2.87□□□□□ -2.87
APS3P47064 YGR122C-AYGR122C-A 129 nt-2.88□□□□□ -2.87
APS3P47064 YGL041C-BYGL041C-B 183 nt-2.89□□□□□ -2.87
APS3P47064 YGL007C-AYGL007C-A 87 nt-2.96□□□□□ -2.88
Retrieved 100 of 7,029 protein–RNA pairs in 68.1 ms