Protein–RNA interactions for Protein: P46673

NUP85, Nucleoporin NUP85, yeastyeast

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP85P46673 NUP192YJL039C 5052 nt1.72□□□□□ -2.13
NUP85P46673 NUP145YGL092W 3954 nt1.71□□□□□ -2.14
NUP85P46673 tQ(UUG)QtQ(UUG)Q 76 nt1.71□□□□□ -2.14
NUP85P46673 MYO1YHR023W 5787 nt1.69□□□□□ -2.14
NUP85P46673 YNL054W-BYNL054W-B 5250 nt1.66□□□□□ -2.14
NUP85P46673 YLL006W-AYLL006W-A 177 nt1.66□□□□□ -2.14
NUP85P46673 FIG2YCR089W 4830 nt1.66□□□□□ -2.14
NUP85P46673 FYV8YGR196C 2454 nt1.65□□□□□ -2.14
NUP85P46673 CFT1YDR301W 4074 nt1.65□□□□□ -2.14
NUP85P46673 CDC39YCR093W 6327 nt1.65□□□□□ -2.15
NUP85P46673 LAA1YJL207C 6045 nt1.63□□□□□ -2.15
NUP85P46673 BST1YFL025C 3090 nt1.62□□□□□ -2.15
NUP85P46673 SPC110YDR356W 2835 nt1.6□□□□□ -2.15
NUP85P46673 YER090C-AYER090C-A 90 nt1.59□□□□□ -2.15
NUP85P46673 SSK2YNR031C 4740 nt1.56□□□□□ -2.16
NUP85P46673 MEC1YBR136W 7107 nt1.56□□□□□ -2.16
NUP85P46673 CAT8YMR280C 4302 nt1.54□□□□□ -2.16
NUP85P46673 BRR2YER172C 6492 nt1.53□□□□□ -2.16
NUP85P46673 YOR376W-AYOR376W-A 156 nt1.53□□□□□ -2.16
NUP85P46673 CLU1YMR012W 3834 nt1.52□□□□□ -2.17
NUP85P46673 YDL114W-AYDL114W-A 114 nt1.5□□□□□ -2.17
NUP85P46673 YGR130CYGR130C 2451 nt1.49□□□□□ -2.17
NUP85P46673 snR67snR67 82 nt1.47□□□□□ -2.17
NUP85P46673 IRA1YBR140C 9279 nt1.46□□□□□ -2.18
NUP85P46673 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
NUP85P46673 YNL284C-BYNL284C-B 5268 nt1.45□□□□□ -2.18
NUP85P46673 SPT7YBR081C 3999 nt1.43□□□□□ -2.18
NUP85P46673 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
NUP85P46673 tV(UAC)QtV(UAC)Q 76 nt1.42□□□□□ -2.18
NUP85P46673 BUD3YCL014W 4911 nt1.41□□□□□ -2.18
NUP85P46673 YKL106C-AYKL106C-A 120 nt1.4□□□□□ -2.19
NUP85P46673 CCH1YGR217W 6120 nt1.4□□□□□ -2.19
NUP85P46673 YOR192C-BYOR192C-B 5313 nt1.38□□□□□ -2.19
NUP85P46673 VAM6YDL077C 3150 nt1.36□□□□□ -2.19
NUP85P46673 snR40snR40 97 nt1.34□□□□□ -2.19
NUP85P46673 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
NUP85P46673 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
NUP85P46673 RKR1YMR247C 4689 nt1.32□□□□□ -2.2
NUP85P46673 YMR160WYMR160W 2451 nt1.32□□□□□ -2.2
NUP85P46673 IML1YJR138W 4755 nt1.3□□□□□ -2.2
NUP85P46673 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
NUP85P46673 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
NUP85P46673 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
NUP85P46673 MLP2YIL149C 5040 nt1.12□□□□□ -2.23
NUP85P46673 YBL100W-BYBL100W-B 5313 nt1.11□□□□□ -2.23
NUP85P46673 PAU24YBR301W 363 nt1.1□□□□□ -2.23
NUP85P46673 BEM2YER155C 6504 nt1.09□□□□□ -2.24
NUP85P46673 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
NUP85P46673 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
NUP85P46673 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
NUP85P46673 LTE1YAL024C 4308 nt1.06□□□□□ -2.24
NUP85P46673 snR77snR77 88 nt1.06□□□□□ -2.24
NUP85P46673 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
NUP85P46673 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
NUP85P46673 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
NUP85P46673 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
NUP85P46673 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
NUP85P46673 YOR316C-AYOR316C-A 210 nt1.02□□□□□ -2.25
NUP85P46673 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
NUP85P46673 YML100W-AYML100W-A 174 nt0.95□□□□□ -2.26
NUP85P46673 SBH2YER019C-A 267 nt0.94□□□□□ -2.26
NUP85P46673 THO2YNL139C 4794 nt0.93□□□□□ -2.26
NUP85P46673 SOV1YMR066W 2697 nt0.91□□□□□ -2.26
NUP85P46673 tF(GAA)BtF(GAA)B 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)FtF(GAA)F 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)GtF(GAA)G 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)H1tF(GAA)H1 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)H2tF(GAA)H2 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)MtF(GAA)M 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)P1tF(GAA)P1 73 nt0.87□□□□□ -2.27
NUP85P46673 tF(GAA)P2tF(GAA)P2 73 nt0.87□□□□□ -2.27
NUP85P46673 UTP20YBL004W 7482 nt0.87□□□□□ -2.27
NUP85P46673 MLP1YKR095W 5628 nt0.84□□□□□ -2.28
NUP85P46673 YOR186C-AYOR186C-A 210 nt0.82□□□□□ -2.28
NUP85P46673 IQG1YPL242C 4488 nt0.75□□□□□ -2.29
NUP85P46673 ESP1YGR098C 4893 nt0.74□□□□□ -2.29
NUP85P46673 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
NUP85P46673 YOL014WYOL014W 375 nt0.7□□□□□ -2.3
NUP85P46673 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
NUP85P46673 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
NUP85P46673 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
NUP85P46673 PAU9YBL108C-A 129 nt0.67□□□□□ -2.3
NUP85P46673 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
NUP85P46673 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
NUP85P46673 FMP27YLR454W 7887 nt0.56□□□□□ -2.32
NUP85P46673 snR128snR128 126 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms