Protein–RNA interactions for Protein: P43606

PTR3, SPS-sensor component PTR3, yeastyeast

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTR3P43606 tF(GAA)H2tF(GAA)H2 73 nt0.43□□□□□ -2.34
PTR3P43606 tF(GAA)MtF(GAA)M 73 nt0.43□□□□□ -2.34
PTR3P43606 tF(GAA)P1tF(GAA)P1 73 nt0.43□□□□□ -2.34
PTR3P43606 tF(GAA)P2tF(GAA)P2 73 nt0.43□□□□□ -2.34
PTR3P43606 YBL053WYBL053W 375 nt0.43□□□□□ -2.34
PTR3P43606 YDR210WYDR210W 228 nt0.42□□□□□ -2.34
PTR3P43606 tM(CAU)Q2tM(CAU)Q2 78 nt0.42□□□□□ -2.34
PTR3P43606 MLP2YIL149C 5040 nt0.41□□□□□ -2.34
PTR3P43606 BIR1YJR089W 2865 nt0.39□□□□□ -2.35
PTR3P43606 QCR9YGR183C 201 nt0.38□□□□□ -2.35
PTR3P43606 YNL338WYNL338W 159 nt0.38□□□□□ -2.35
PTR3P43606 YGR146C-AYGR146C-A 162 nt0.37□□□□□ -2.35
PTR3P43606 YKL145W-AYKL145W-A 93 nt0.37□□□□□ -2.35
PTR3P43606 CSE1YGL238W 2883 nt0.35□□□□□ -2.35
PTR3P43606 YBR099CYBR099C 384 nt0.34□□□□□ -2.36
PTR3P43606 YOR186C-AYOR186C-A 210 nt0.32□□□□□ -2.36
PTR3P43606 YNL054W-BYNL054W-B 5250 nt0.32□□□□□ -2.36
PTR3P43606 YNL067W-BYNL067W-B 141 nt0.31□□□□□ -2.36
PTR3P43606 YOL014WYOL014W 375 nt0.31□□□□□ -2.36
PTR3P43606 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
PTR3P43606 SOV1YMR066W 2697 nt0.28□□□□□ -2.37
PTR3P43606 YLR294CYLR294C 330 nt0.27□□□□□ -2.37
PTR3P43606 AI1Q0050 2505 nt0.27□□□□□ -2.37
PTR3P43606 YNL205CYNL205C 423 nt0.22□□□□□ -2.37
PTR3P43606 EST1YLR233C 2100 nt0.22□□□□□ -2.37
PTR3P43606 YJL077W-AYJL077W-A 87 nt0.2□□□□□ -2.38
PTR3P43606 snR69snR69 101 nt0.19□□□□□ -2.38
PTR3P43606 PMP2YEL017C-A 132 nt0.19□□□□□ -2.38
PTR3P43606 YCR095W-AYCR095W-A 159 nt0.12□□□□□ -2.39
PTR3P43606 YGR164WYGR164W 336 nt0.12□□□□□ -2.39
PTR3P43606 YIL071W-AYIL071W-A 477 nt0.12□□□□□ -2.39
PTR3P43606 SEC10YLR166C 2616 nt0.12□□□□□ -2.39
PTR3P43606 SOM1YEL059C-A 225 nt0.11□□□□□ -2.39
PTR3P43606 THO2YNL139C 4794 nt0.1□□□□□ -2.39
PTR3P43606 RDS3YPR094W 324 nt0.09□□□□□ -2.4
PTR3P43606 YER078W-AYER078W-A 165 nt0.08□□□□□ -2.4
PTR3P43606 YNL266WYNL266W 420 nt0.07□□□□□ -2.4
PTR3P43606 tD(GUC)QtD(GUC)Q 75 nt0.05□□□□□ -2.4
PTR3P43606 YCL001W-BYCL001W-B 255 nt0.05□□□□□ -2.4
PTR3P43606 tQ(UUG)QtQ(UUG)Q 76 nt0.02□□□□□ -2.41
PTR3P43606 snR128snR128 126 nt0□□□□□ -2.41
PTR3P43606 YBR178WYBR178W 375 nt0□□□□□ -2.41
PTR3P43606 YER090C-AYER090C-A 90 nt-0.02□□□□□ -2.41
PTR3P43606 YBR196C-AYBR196C-A 150 nt-0.03□□□□□ -2.41
PTR3P43606 snR45snR45 172 nt-0.04□□□□□ -2.42
PTR3P43606 YLR286W-AYLR286W-A 135 nt-0.05□□□□□ -2.42
PTR3P43606 YML100W-AYML100W-A 174 nt-0.05□□□□□ -2.42
PTR3P43606 YDL159C-BYDL159C-B 177 nt-0.08□□□□□ -2.42
PTR3P43606 YNL170WYNL170W 396 nt-0.09□□□□□ -2.42
PTR3P43606 snR50snR50 90 nt-0.09□□□□□ -2.42
PTR3P43606 ATP8Q0080 147 nt-0.11□□□□□ -2.43
PTR3P43606 YLR299C-AYLR299C-A 93 nt-0.16□□□□□ -2.44
PTR3P43606 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
PTR3P43606 snR67snR67 82 nt-0.24□□□□□ -2.45
PTR3P43606 Q0092Q0092 141 nt-0.24□□□□□ -2.45
PTR3P43606 TFB5YDR079C-A 219 nt-0.29□□□□□ -2.46
PTR3P43606 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
PTR3P43606 URB1YKL014C 5295 nt-0.31□□□□□ -2.46
PTR3P43606 YAL037C-AYAL037C-A 93 nt-0.32□□□□□ -2.46
PTR3P43606 tA(UGC)QtA(UGC)Q 76 nt-0.33□□□□□ -2.46
PTR3P43606 YML054C-AYML054C-A 159 nt-0.33□□□□□ -2.46
PTR3P43606 YBL071C-BYBL071C-B 99 nt-0.34□□□□□ -2.46
PTR3P43606 snR81snR81 201 nt-0.36□□□□□ -2.47
PTR3P43606 YOL083C-AYOL083C-A 141 nt-0.36□□□□□ -2.47
PTR3P43606 SKI7YOR076C 2244 nt-0.38□□□□□ -2.47
PTR3P43606 PAU9YBL108C-A 129 nt-0.39□□□□□ -2.47
PTR3P43606 snR61snR61 90 nt-0.41□□□□□ -2.48
PTR3P43606 YNL103W-AYNL103W-A 90 nt-0.41□□□□□ -2.48
PTR3P43606 YHR180C-BYHR180C-B 105 nt-0.42□□□□□ -2.48
PTR3P43606 YOL164W-AYOL164W-A 183 nt-0.47□□□□□ -2.48
PTR3P43606 YHL009W-BYHL009W-B 5409 nt-0.48□□□□□ -2.49
PTR3P43606 YGL041C-BYGL041C-B 183 nt-0.49□□□□□ -2.49
PTR3P43606 Q0143Q0143 153 nt-0.52□□□□□ -2.49
PTR3P43606 YBR109W-AYBR109W-A 225 nt-0.54□□□□□ -2.5
PTR3P43606 YGR240C-AYGR240C-A 201 nt-0.58□□□□□ -2.5
PTR3P43606 YBL100W-CYBL100W-C 120 nt-0.58□□□□□ -2.5
PTR3P43606 YBR296C-AYBR296C-A 120 nt-0.59□□□□□ -2.5
PTR3P43606 RPL41AYDL184C 78 nt-0.62□□□□□ -2.51
PTR3P43606 snR47snR47 99 nt-0.62□□□□□ -2.51
PTR3P43606 snR38snR38 95 nt-0.63□□□□□ -2.51
PTR3P43606 tS(GCU)Q1tS(GCU)Q1 86 nt-0.72□□□□□ -2.52
PTR3P43606 snR161snR161 161 nt-0.72□□□□□ -2.52
PTR3P43606 snR33snR33 183 nt-0.73□□□□□ -2.53
PTR3P43606 snR62snR62 100 nt-0.74□□□□□ -2.53
PTR3P43606 snR85snR85 171 nt-0.76□□□□□ -2.53
PTR3P43606 YOR376W-AYOR376W-A 156 nt-0.76□□□□□ -2.53
PTR3P43606 YKL106C-AYKL106C-A 120 nt-0.8□□□□□ -2.54
PTR3P43606 YMR326CYMR326C 309 nt-0.8□□□□□ -2.54
PTR3P43606 YHR217CYHR217C 462 nt-0.81□□□□□ -2.54
PTR3P43606 YDR034C-AYDR034C-A 177 nt-0.84□□□□□ -2.54
PTR3P43606 YKL225WYKL225W 348 nt-0.85□□□□□ -2.55
PTR3P43606 YOR316C-AYOR316C-A 210 nt-0.89□□□□□ -2.55
PTR3P43606 tT(UGU)G1tT(UGU)G1 72 nt-0.9□□□□□ -2.55
PTR3P43606 tT(UGU)G2tT(UGU)G2 72 nt-0.9□□□□□ -2.55
PTR3P43606 tT(UGU)PtT(UGU)P 72 nt-0.9□□□□□ -2.55
PTR3P43606 YBL109WYBL109W 336 nt-0.91□□□□□ -2.56
PTR3P43606 tP(UGG)QtP(UGG)Q 72 nt-0.97□□□□□ -2.56
PTR3P43606 snR77snR77 88 nt-1.01□□□□□ -2.57
PTR3P43606 CDC65tQ(CUG)M 72 nt-1.04□□□□□ -2.58
PTR3P43606 snR64snR64 101 nt-1.1□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms