Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC1A1P43005 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC1A1P43005 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A1P43005 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC1A1P43005 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 AC023632.3-201ENST00000521633 145 ntBASIC20.87■□□□□ 0.93
SLC1A1P43005 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC1A1P43005 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC1A1P43005 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC1A1P43005 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC1A1P43005 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC1A1P43005 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC1A1P43005 C2orf69P4-201ENST00000565394 541 ntBASIC20.86■□□□□ 0.93
SLC1A1P43005 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC1A1P43005 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A1P43005 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC1A1P43005 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC1A1P43005 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC1A1P43005 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLC1A1P43005 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC1A1P43005 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC1A1P43005 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
SLC1A1P43005 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLC1A1P43005 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC1A1P43005 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A1P43005 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC1A1P43005 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC1A1P43005 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC1A1P43005 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.84■□□□□ 0.93
SLC1A1P43005 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC1A1P43005 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC1A1P43005 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC1A1P43005 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC1A1P43005 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A1P43005 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A1P43005 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC1A1P43005 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A1P43005 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A1P43005 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC1A1P43005 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC1A1P43005 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.83■□□□□ 0.93
SLC1A1P43005 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A1P43005 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SLC1A1P43005 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A1P43005 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC1A1P43005 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC1A1P43005 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC1A1P43005 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC1A1P43005 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SLC1A1P43005 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC1A1P43005 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC1A1P43005 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC1A1P43005 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC1A1P43005 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A1P43005 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SLC1A1P43005 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A1P43005 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A1P43005 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms