Protein–RNA interactions for Protein: P42837

FIG4, Polyphosphoinositide phosphatase, yeastyeast

Predictions only

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIG4P42837 NIP1YMR309C 2439 nt1.63□□□□□ -2.15
FIG4P42837 PAU12YGR294W 363 nt1.62□□□□□ -2.15
FIG4P42837 YKL096C-BYKL096C-B 150 nt1.62□□□□□ -2.15
FIG4P42837 YLR149C-AYLR149C-A 87 nt1.6□□□□□ -2.15
FIG4P42837 FYV8YGR196C 2454 nt1.59□□□□□ -2.15
FIG4P42837 CCH1YGR217W 6120 nt1.58□□□□□ -2.16
FIG4P42837 SKI7YOR076C 2244 nt1.58□□□□□ -2.16
FIG4P42837 YGR130CYGR130C 2451 nt1.57□□□□□ -2.16
FIG4P42837 tQ(UUG)QtQ(UUG)Q 76 nt1.57□□□□□ -2.16
FIG4P42837 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
FIG4P42837 snR38snR38 95 nt1.56□□□□□ -2.16
FIG4P42837 AI1Q0050 2505 nt1.54□□□□□ -2.16
FIG4P42837 YDL159W-AYDL159W-A 132 nt1.52□□□□□ -2.17
FIG4P42837 SPT7YBR081C 3999 nt1.5□□□□□ -2.17
FIG4P42837 tQ(UUG)E2tQ(UUG)E2 72 nt1.49□□□□□ -2.17
FIG4P42837 SPC110YDR356W 2835 nt1.46□□□□□ -2.18
FIG4P42837 FIG2YCR089W 4830 nt1.46□□□□□ -2.18
FIG4P42837 snR75snR75 89 nt1.46□□□□□ -2.18
FIG4P42837 YER078W-AYER078W-A 165 nt1.46□□□□□ -2.18
FIG4P42837 YGR122C-AYGR122C-A 129 nt1.45□□□□□ -2.18
FIG4P42837 YPR117WYPR117W 7470 nt1.42□□□□□ -2.18
FIG4P42837 YER090C-AYER090C-A 90 nt1.41□□□□□ -2.18
FIG4P42837 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
FIG4P42837 IML1YJR138W 4755 nt1.39□□□□□ -2.19
FIG4P42837 tH(GUG)E1tH(GUG)E1 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)E2tH(GUG)E2 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)G1tH(GUG)G1 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)G2tH(GUG)G2 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)HtH(GUG)H 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)KtH(GUG)K 72 nt1.37□□□□□ -2.19
FIG4P42837 tH(GUG)MtH(GUG)M 72 nt1.37□□□□□ -2.19
FIG4P42837 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
FIG4P42837 MLP2YIL149C 5040 nt1.31□□□□□ -2.2
FIG4P42837 YOR192C-BYOR192C-B 5313 nt1.3□□□□□ -2.2
FIG4P42837 SCC2YDR180W 4482 nt1.28□□□□□ -2.2
FIG4P42837 LTE1YAL024C 4308 nt1.28□□□□□ -2.21
FIG4P42837 snR67snR67 82 nt1.27□□□□□ -2.21
FIG4P42837 RKR1YMR247C 4689 nt1.27□□□□□ -2.21
FIG4P42837 VAM6YDL077C 3150 nt1.24□□□□□ -2.21
FIG4P42837 PET111YMR257C 2403 nt1.22□□□□□ -2.21
FIG4P42837 YNL054W-BYNL054W-B 5250 nt1.22□□□□□ -2.21
FIG4P42837 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
FIG4P42837 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
FIG4P42837 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
FIG4P42837 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
FIG4P42837 BEM2YER155C 6504 nt1.12□□□□□ -2.23
FIG4P42837 PAU24YBR301W 363 nt1.11□□□□□ -2.23
FIG4P42837 DOP1YDR141C 5097 nt1.09□□□□□ -2.23
FIG4P42837 MLP1YKR095W 5628 nt1.09□□□□□ -2.23
FIG4P42837 BUD3YCL014W 4911 nt1.09□□□□□ -2.24
FIG4P42837 MYO1YHR023W 5787 nt1.08□□□□□ -2.24
FIG4P42837 YBL100W-BYBL100W-B 5313 nt1.06□□□□□ -2.24
FIG4P42837 YKL106C-AYKL106C-A 120 nt1.04□□□□□ -2.24
FIG4P42837 YMR160WYMR160W 2451 nt1.04□□□□□ -2.24
FIG4P42837 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
FIG4P42837 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
FIG4P42837 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
FIG4P42837 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
FIG4P42837 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
FIG4P42837 YDL114W-AYDL114W-A 114 nt0.97□□□□□ -2.25
FIG4P42837 YOR186C-AYOR186C-A 210 nt0.92□□□□□ -2.26
FIG4P42837 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
FIG4P42837 tV(UAC)QtV(UAC)Q 76 nt0.84□□□□□ -2.27
FIG4P42837 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
FIG4P42837 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
FIG4P42837 YML100W-AYML100W-A 174 nt0.81□□□□□ -2.28
FIG4P42837 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
FIG4P42837 tF(GAA)BtF(GAA)B 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)FtF(GAA)F 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)GtF(GAA)G 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)H1tF(GAA)H1 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)H2tF(GAA)H2 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)MtF(GAA)M 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)P1tF(GAA)P1 73 nt0.78□□□□□ -2.28
FIG4P42837 tF(GAA)P2tF(GAA)P2 73 nt0.78□□□□□ -2.28
FIG4P42837 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
FIG4P42837 YOR376W-AYOR376W-A 156 nt0.71□□□□□ -2.3
FIG4P42837 YOR316C-AYOR316C-A 210 nt0.66□□□□□ -2.3
FIG4P42837 UTP10YJL109C 5310 nt0.65□□□□□ -2.3
FIG4P42837 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
FIG4P42837 YOL014WYOL014W 375 nt0.64□□□□□ -2.31
FIG4P42837 ESP1YGR098C 4893 nt0.64□□□□□ -2.31
FIG4P42837 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
FIG4P42837 YKL145W-AYKL145W-A 93 nt0.62□□□□□ -2.31
FIG4P42837 SOV1YMR066W 2697 nt0.6□□□□□ -2.31
FIG4P42837 snR77snR77 88 nt0.59□□□□□ -2.31
FIG4P42837 SBH2YER019C-A 267 nt0.59□□□□□ -2.31
FIG4P42837 snR128snR128 126 nt0.53□□□□□ -2.32
FIG4P42837 PAU9YBL108C-A 129 nt0.52□□□□□ -2.33
FIG4P42837 snR40snR40 97 nt0.51□□□□□ -2.33
FIG4P42837 THO2YNL139C 4794 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms