Protein–RNA interactions for Protein: P40460

NDC80, Kinetochore protein NDC80, yeastyeast

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC80P40460 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
NDC80P40460 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
NDC80P40460 DOP1YDR141C 5097 nt1.06□□□□□ -2.24
NDC80P40460 snR62snR62 100 nt1.03□□□□□ -2.24
NDC80P40460 RPS26AYGL189C 360 nt1.03□□□□□ -2.24
NDC80P40460 YPL060C-AYPL060C-A 3315 nt1.02□□□□□ -2.25
NDC80P40460 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
NDC80P40460 YLL006W-AYLL006W-A 177 nt1.01□□□□□ -2.25
NDC80P40460 MYO1YHR023W 5787 nt1□□□□□ -2.25
NDC80P40460 YLR286W-AYLR286W-A 135 nt1□□□□□ -2.25
NDC80P40460 EST1YLR233C 2100 nt0.99□□□□□ -2.25
NDC80P40460 CSE1YGL238W 2883 nt0.98□□□□□ -2.25
NDC80P40460 tD(GUC)QtD(GUC)Q 75 nt0.98□□□□□ -2.25
NDC80P40460 YOL164W-AYOL164W-A 183 nt0.97□□□□□ -2.25
NDC80P40460 PAU24YBR301W 363 nt0.97□□□□□ -2.25
NDC80P40460 snR69snR69 101 nt0.96□□□□□ -2.26
NDC80P40460 NIP1YMR309C 2439 nt0.94□□□□□ -2.26
NDC80P40460 BUL2YML111W 2763 nt0.94□□□□□ -2.26
NDC80P40460 YBL100W-CYBL100W-C 120 nt0.93□□□□□ -2.26
NDC80P40460 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
NDC80P40460 YDR034C-AYDR034C-A 177 nt0.91□□□□□ -2.26
NDC80P40460 YGR240C-AYGR240C-A 201 nt0.91□□□□□ -2.26
NDC80P40460 YLR299C-AYLR299C-A 93 nt0.89□□□□□ -2.27
NDC80P40460 RDS3YPR094W 324 nt0.88□□□□□ -2.27
NDC80P40460 YDL159C-BYDL159C-B 177 nt0.87□□□□□ -2.27
NDC80P40460 snR47snR47 99 nt0.86□□□□□ -2.27
NDC80P40460 PAU12YGR294W 363 nt0.85□□□□□ -2.27
NDC80P40460 ORC3YLL004W 1851 nt0.85□□□□□ -2.27
NDC80P40460 YJL077W-AYJL077W-A 87 nt0.84□□□□□ -2.27
NDC80P40460 YNL054W-BYNL054W-B 5250 nt0.84□□□□□ -2.28
NDC80P40460 YDR371C-AYDR371C-A 105 nt0.81□□□□□ -2.28
NDC80P40460 UTP20YBL004W 7482 nt0.79□□□□□ -2.28
NDC80P40460 PET111YMR257C 2403 nt0.79□□□□□ -2.28
NDC80P40460 tQ(UUG)QtQ(UUG)Q 76 nt0.78□□□□□ -2.28
NDC80P40460 YMR272W-AYMR272W-A 114 nt0.76□□□□□ -2.29
NDC80P40460 YML054C-AYML054C-A 159 nt0.75□□□□□ -2.29
NDC80P40460 LTE1YAL024C 4308 nt0.74□□□□□ -2.29
NDC80P40460 tF(GAA)BtF(GAA)B 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)FtF(GAA)F 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)GtF(GAA)G 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)H1tF(GAA)H1 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)H2tF(GAA)H2 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)MtF(GAA)M 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)P1tF(GAA)P1 73 nt0.72□□□□□ -2.29
NDC80P40460 tF(GAA)P2tF(GAA)P2 73 nt0.72□□□□□ -2.29
NDC80P40460 YHR180C-BYHR180C-B 105 nt0.71□□□□□ -2.3
NDC80P40460 YMR160WYMR160W 2451 nt0.7□□□□□ -2.3
NDC80P40460 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
NDC80P40460 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
NDC80P40460 YBL100W-BYBL100W-B 5313 nt0.69□□□□□ -2.3
NDC80P40460 YER090C-AYER090C-A 90 nt0.68□□□□□ -2.3
NDC80P40460 YPR159C-AYPR159C-A 102 nt0.68□□□□□ -2.3
NDC80P40460 YBR109W-AYBR109W-A 225 nt0.68□□□□□ -2.3
NDC80P40460 snR50snR50 90 nt0.68□□□□□ -2.3
NDC80P40460 snR64snR64 101 nt0.63□□□□□ -2.31
NDC80P40460 RPL41AYDL184C 78 nt0.63□□□□□ -2.31
NDC80P40460 YKL225WYKL225W 348 nt0.63□□□□□ -2.31
NDC80P40460 MLP1YKR095W 5628 nt0.61□□□□□ -2.31
NDC80P40460 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
NDC80P40460 snR38snR38 95 nt0.6□□□□□ -2.31
NDC80P40460 YBR296C-AYBR296C-A 120 nt0.6□□□□□ -2.31
NDC80P40460 snR53snR53 91 nt0.58□□□□□ -2.32
NDC80P40460 AI1Q0050 2505 nt0.57□□□□□ -2.32
NDC80P40460 YOL014WYOL014W 375 nt0.56□□□□□ -2.32
NDC80P40460 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
NDC80P40460 snR67snR67 82 nt0.53□□□□□ -2.32
NDC80P40460 YOR186C-AYOR186C-A 210 nt0.5□□□□□ -2.33
NDC80P40460 IQG1YPL242C 4488 nt0.46□□□□□ -2.34
NDC80P40460 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
NDC80P40460 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
NDC80P40460 SKI7YOR076C 2244 nt0.4□□□□□ -2.35
NDC80P40460 YDL159W-AYDL159W-A 132 nt0.4□□□□□ -2.35
NDC80P40460 MLP2YIL149C 5040 nt0.38□□□□□ -2.35
NDC80P40460 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
NDC80P40460 YML100W-AYML100W-A 174 nt0.37□□□□□ -2.35
NDC80P40460 THO2YNL139C 4794 nt0.33□□□□□ -2.36
NDC80P40460 YGR122C-AYGR122C-A 129 nt0.3□□□□□ -2.36
NDC80P40460 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
NDC80P40460 snR128snR128 126 nt0.26□□□□□ -2.37
NDC80P40460 YER078W-AYER078W-A 165 nt0.25□□□□□ -2.37
NDC80P40460 YLR149C-AYLR149C-A 87 nt0.25□□□□□ -2.37
NDC80P40460 YKL106C-AYKL106C-A 120 nt0.24□□□□□ -2.37
NDC80P40460 PAU9YBL108C-A 129 nt0.14□□□□□ -2.39
NDC80P40460 YOR376W-AYOR376W-A 156 nt0.12□□□□□ -2.39
NDC80P40460 YKL096C-BYKL096C-B 150 nt0.07□□□□□ -2.4
NDC80P40460 YDL114W-AYDL114W-A 114 nt0.06□□□□□ -2.4
NDC80P40460 tA(UGC)QtA(UGC)Q 76 nt0.01□□□□□ -2.41
NDC80P40460 tV(UAC)QtV(UAC)Q 76 nt0.01□□□□□ -2.41
NDC80P40460 YOR316C-AYOR316C-A 210 nt0.01□□□□□ -2.41
NDC80P40460 SBH2YER019C-A 267 nt-0.07□□□□□ -2.42
NDC80P40460 snR77snR77 88 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms