Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 BIL1YOR304C-A 231 nt-2.17□□□□□ -2.76
SSN2P38931 YOR381W-AYOR381W-A 168 nt-2.18□□□□□ -2.76
SSN2P38931 YGL041CYGL041C 204 nt-2.22□□□□□ -2.76
SSN2P38931 YOL013W-BYOL013W-B 291 nt-2.23□□□□□ -2.77
SSN2P38931 YDL159C-BYDL159C-B 177 nt-2.24□□□□□ -2.77
SSN2P38931 YMR172C-AYMR172C-A 384 nt-2.26□□□□□ -2.77
SSN2P38931 YBR178WYBR178W 375 nt-2.28□□□□□ -2.77
SSN2P38931 YOR376W-AYOR376W-A 156 nt-2.29□□□□□ -2.78
SSN2P38931 YBR182C-AYBR182C-A 195 nt-2.29□□□□□ -2.78
SSN2P38931 YEL014CYEL014C 306 nt-2.34□□□□□ -2.78
SSN2P38931 YKL063CYKL063C 504 nt-2.34□□□□□ -2.78
SSN2P38931 YNR025CYNR025C 360 nt-2.34□□□□□ -2.78
SSN2P38931 YAL016C-BYAL016C-B 186 nt-2.37□□□□□ -2.79
SSN2P38931 YJR157WYJR157W 363 nt-2.37□□□□□ -2.79
SSN2P38931 YOR329W-AYOR329W-A 210 nt-2.37□□□□□ -2.79
SSN2P38931 ATP19YOL077W-A 207 nt-2.42□□□□□ -2.8
SSN2P38931 YAL063C-AYAL063C-A 291 nt-2.42□□□□□ -2.8
SSN2P38931 YBR196C-AYBR196C-A 150 nt-2.44□□□□□ -2.8
SSN2P38931 YGR035CYGR035C 351 nt-2.45□□□□□ -2.8
SSN2P38931 snR78snR78 87 nt-2.46□□□□□ -2.8
SSN2P38931 YDR183C-AYDR183C-A 258 nt-2.48□□□□□ -2.81
SSN2P38931 YLR342W-AYLR342W-A 174 nt-2.48□□□□□ -2.81
SSN2P38931 YLR299C-AYLR299C-A 93 nt-2.49□□□□□ -2.81
SSN2P38931 YDR524W-CYDR524W-C 90 nt-2.5□□□□□ -2.81
SSN2P38931 YOL083C-AYOL083C-A 141 nt-2.5□□□□□ -2.81
SSN2P38931 YOR316C-AYOR316C-A 210 nt-2.55□□□□□ -2.82
SSN2P38931 YBR131C-AYBR131C-A 90 nt-2.56□□□□□ -2.82
SSN2P38931 YLR222C-AYLR222C-A 231 nt-2.57□□□□□ -2.82
SSN2P38931 tF(GAA)QtF(GAA)Q 75 nt-2.58□□□□□ -2.82
SSN2P38931 YPR197CYPR197C 564 nt-2.58□□□□□ -2.82
SSN2P38931 YER181CYER181C 324 nt-2.59□□□□□ -2.82
SSN2P38931 YHR180C-BYHR180C-B 105 nt-2.62□□□□□ -2.83
SSN2P38931 YPR012WYPR012W 255 nt-2.63□□□□□ -2.83
SSN2P38931 tR(UCU)Q1tR(UCU)Q1 73 nt-2.64□□□□□ -2.83
SSN2P38931 YOR102WYOR102W 351 nt-2.65□□□□□ -2.83
SSN2P38931 YDR413CYDR413C 576 nt-2.68□□□□□ -2.84
SSN2P38931 snR48snR48 113 nt-2.68□□□□□ -2.84
SSN2P38931 snR55snR55 98 nt-2.69□□□□□ -2.84
SSN2P38931 YPL038W-AYPL038W-A 192 nt-2.7□□□□□ -2.84
SSN2P38931 YKL106C-AYKL106C-A 120 nt-2.71□□□□□ -2.84
SSN2P38931 YGL188C-AYGL188C-A 141 nt-2.74□□□□□ -2.85
SSN2P38931 snR6snR6 112 nt-2.75□□□□□ -2.85
SSN2P38931 YKL118WYKL118W 312 nt-2.76□□□□□ -2.85
SSN2P38931 YNL097C-BYNL097C-B 123 nt-2.78□□□□□ -2.85
SSN2P38931 tL(UAA)QtL(UAA)Q 85 nt-2.82□□□□□ -2.86
SSN2P38931 RPL39YJL189W 156 nt-2.88□□□□□ -2.87
SSN2P38931 YEL050W-AYEL050W-A 192 nt-2.89□□□□□ -2.87
SSN2P38931 YOL155W-AYOL155W-A 135 nt-2.89□□□□□ -2.87
SSN2P38931 snR73snR73 106 nt-2.9□□□□□ -2.87
SSN2P38931 YNL277W-AYNL277W-A 189 nt-2.93□□□□□ -2.88
SSN2P38931 YOR335W-AYOR335W-A 81 nt-2.93□□□□□ -2.88
SSN2P38931 snR80snR80 171 nt-2.93□□□□□ -2.88
SSN2P38931 YJL150WYJL150W 303 nt-2.95□□□□□ -2.88
SSN2P38931 YBR109W-AYBR109W-A 225 nt-2.96□□□□□ -2.88
SSN2P38931 RPL41BYDL133C-A 78 nt-3.06□□□□□ -2.9
SSN2P38931 YDR524C-AYDR524C-A 120 nt-3.06□□□□□ -2.9
SSN2P38931 YOR302WYOR302W 78 nt-3.06□□□□□ -2.9
SSN2P38931 GIM4YEL003W 336 nt-3.07□□□□□ -2.9
SSN2P38931 YHL015W-AYHL015W-A 84 nt-3.09□□□□□ -2.9
SSN2P38931 snR56snR56 88 nt-3.1□□□□□ -2.91
SSN2P38931 YNL198CYNL198C 303 nt-3.1□□□□□ -2.91
SSN2P38931 YBR296C-AYBR296C-A 120 nt-3.1□□□□□ -2.91
SSN2P38931 snR52snR52 92 nt-3.1□□□□□ -2.91
SSN2P38931 RPL41AYDL184C 78 nt-3.12□□□□□ -2.91
SSN2P38931 YDL240C-AYDL240C-A 138 nt-3.12□□□□□ -2.91
SSN2P38931 snR38snR38 95 nt-3.16□□□□□ -2.92
SSN2P38931 YDR157WYDR157W 402 nt-3.18□□□□□ -2.92
SSN2P38931 YJR162CYJR162C 351 nt-3.25□□□□□ -2.93
SSN2P38931 YNL337WYNL337W 255 nt-3.25□□□□□ -2.93
SSN2P38931 SOM1YEL059C-A 225 nt-3.29□□□□□ -2.94
SSN2P38931 YPL152W-AYPL152W-A 99 nt-3.38□□□□□ -2.95
SSN2P38931 YDR406W-AYDR406W-A 246 nt-3.39□□□□□ -2.95
SSN2P38931 YCR095W-AYCR095W-A 159 nt-3.4□□□□□ -2.95
SSN2P38931 YDR118W-AYDR118W-A 117 nt-3.41□□□□□ -2.96
SSN2P38931 snR87snR87 109 nt-3.49□□□□□ -2.97
SSN2P38931 snR85snR85 171 nt-3.5□□□□□ -2.97
SSN2P38931 tV(UAC)QtV(UAC)Q 76 nt-3.5□□□□□ -2.97
SSN2P38931 YOL164W-AYOL164W-A 183 nt-3.5□□□□□ -2.97
SSN2P38931 YBL071C-BYBL071C-B 99 nt-3.51□□□□□ -2.97
SSN2P38931 snR65snR65 100 nt-3.52□□□□□ -2.97
SSN2P38931 YGR151CYGR151C 336 nt-3.54□□□□□ -2.98
SSN2P38931 YDL114W-AYDL114W-A 114 nt-3.55□□□□□ -2.98
SSN2P38931 snR47snR47 99 nt-3.57□□□□□ -2.98
SSN2P38931 Q0017Q0017 162 nt-3.57□□□□□ -2.98
SSN2P38931 YBL053WYBL053W 375 nt-3.61□□□□□ -2.99
SSN2P38931 YAL037C-AYAL037C-A 93 nt-3.76□□□□□ -3.01
SSN2P38931 YBL100W-CYBL100W-C 120 nt-3.77□□□□□ -3.01
SSN2P38931 SPG3YDR504C 384 nt-3.78□□□□□ -3.01
SSN2P38931 YKL225WYKL225W 348 nt-3.78□□□□□ -3.02
SSN2P38931 VAR1Q0140 1197 nt-3.79□□□□□ -3.02
SSN2P38931 tS(GCU)Q1tS(GCU)Q1 86 nt-3.86□□□□□ -3.03
SSN2P38931 YKL096C-BYKL096C-B 150 nt-3.91□□□□□ -3.04
SSN2P38931 YHR175W-AYHR175W-A 150 nt-3.95□□□□□ -3.04
SSN2P38931 YOR231C-AYOR231C-A 201 nt-3.99□□□□□ -3.05
SSN2P38931 snR58snR58 96 nt-4.01□□□□□ -3.05
SSN2P38931 YDL159W-AYDL159W-A 132 nt-4.04□□□□□ -3.06
SSN2P38931 YGR122C-AYGR122C-A 129 nt-4.1□□□□□ -3.07
SSN2P38931 YCL001W-BYCL001W-B 255 nt-4.12□□□□□ -3.07
SSN2P38931 YDR034C-AYDR034C-A 177 nt-4.19□□□□□ -3.08
SSN2P38931 YJL136W-AYJL136W-A 84 nt-4.26□□□□□ -3.09
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms