Protein–RNA interactions for Protein: P38803

IPI1, Pre-rRNA-processing protein IPI1, yeastyeast

Predicted RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IPI1P38803 YBR182C-AYBR182C-A 195 nt-1.39□□□□□ -2.63
IPI1P38803 tD(GUC)QtD(GUC)Q 75 nt-1.4□□□□□ -2.63
IPI1P38803 YBR131C-AYBR131C-A 90 nt-1.4□□□□□ -2.63
IPI1P38803 YLR286W-AYLR286W-A 135 nt-1.42□□□□□ -2.64
IPI1P38803 YOR329W-AYOR329W-A 210 nt-1.43□□□□□ -2.64
IPI1P38803 YNL205CYNL205C 423 nt-1.45□□□□□ -2.64
IPI1P38803 tF(GAA)QtF(GAA)Q 75 nt-1.46□□□□□ -2.64
IPI1P38803 YML054C-AYML054C-A 159 nt-1.46□□□□□ -2.64
IPI1P38803 YBR178WYBR178W 375 nt-1.46□□□□□ -2.64
IPI1P38803 CDC65tQ(CUG)M 72 nt-1.47□□□□□ -2.64
IPI1P38803 snR77snR77 88 nt-1.49□□□□□ -2.65
IPI1P38803 tY(GUA)QtY(GUA)Q 84 nt-1.49□□□□□ -2.65
IPI1P38803 YPR197CYPR197C 564 nt-1.49□□□□□ -2.65
IPI1P38803 YDL159C-BYDL159C-B 177 nt-1.5□□□□□ -2.65
IPI1P38803 YAL016C-BYAL016C-B 186 nt-1.5□□□□□ -2.65
IPI1P38803 YPL038W-AYPL038W-A 192 nt-1.55□□□□□ -2.66
IPI1P38803 YER181CYER181C 324 nt-1.56□□□□□ -2.66
IPI1P38803 YGR240C-AYGR240C-A 201 nt-1.57□□□□□ -2.66
IPI1P38803 YLR222C-AYLR222C-A 231 nt-1.59□□□□□ -2.66
IPI1P38803 YNL097C-BYNL097C-B 123 nt-1.61□□□□□ -2.67
IPI1P38803 snR81snR81 201 nt-1.62□□□□□ -2.67
IPI1P38803 YDR157WYDR157W 402 nt-1.62□□□□□ -2.67
IPI1P38803 YDR413CYDR413C 576 nt-1.62□□□□□ -2.67
IPI1P38803 YNL277W-AYNL277W-A 189 nt-1.62□□□□□ -2.67
IPI1P38803 YMR315W-AYMR315W-A 108 nt-1.63□□□□□ -2.67
IPI1P38803 snR55snR55 98 nt-1.65□□□□□ -2.67
IPI1P38803 RPL39YJL189W 156 nt-1.65□□□□□ -2.67
IPI1P38803 YLR299C-AYLR299C-A 93 nt-1.69□□□□□ -2.68
IPI1P38803 YOR376W-AYOR376W-A 156 nt-1.7□□□□□ -2.68
IPI1P38803 YDL240C-AYDL240C-A 138 nt-1.71□□□□□ -2.68
IPI1P38803 YKL118WYKL118W 312 nt-1.71□□□□□ -2.68
IPI1P38803 snR48snR48 113 nt-1.72□□□□□ -2.68
IPI1P38803 tL(UAA)QtL(UAA)Q 85 nt-1.73□□□□□ -2.69
IPI1P38803 YGL188C-AYGL188C-A 141 nt-1.73□□□□□ -2.69
IPI1P38803 Q0017Q0017 162 nt-1.73□□□□□ -2.69
IPI1P38803 YDR118W-AYDR118W-A 117 nt-1.74□□□□□ -2.69
IPI1P38803 YNR077CYNR077C 255 nt-1.75□□□□□ -2.69
IPI1P38803 YOR102WYOR102W 351 nt-1.75□□□□□ -2.69
IPI1P38803 YOR302WYOR302W 78 nt-1.75□□□□□ -2.69
IPI1P38803 YBR196C-AYBR196C-A 150 nt-1.75□□□□□ -2.69
IPI1P38803 YOL155W-AYOL155W-A 135 nt-1.81□□□□□ -2.7
IPI1P38803 snR52snR52 92 nt-1.83□□□□□ -2.7
IPI1P38803 GIM4YEL003W 336 nt-1.85□□□□□ -2.71
IPI1P38803 VAR1Q0140 1197 nt-1.9□□□□□ -2.71
IPI1P38803 YOR309CYOR309C 381 nt-1.9□□□□□ -2.71
IPI1P38803 YHR180C-BYHR180C-B 105 nt-1.91□□□□□ -2.72
IPI1P38803 YLR342W-AYLR342W-A 174 nt-1.92□□□□□ -2.72
IPI1P38803 YOR316C-AYOR316C-A 210 nt-1.93□□□□□ -2.72
IPI1P38803 YHL015W-AYHL015W-A 84 nt-1.94□□□□□ -2.72
IPI1P38803 YPL152W-AYPL152W-A 99 nt-1.95□□□□□ -2.72
IPI1P38803 YPR012WYPR012W 255 nt-1.95□□□□□ -2.72
IPI1P38803 YKL106C-AYKL106C-A 120 nt-1.99□□□□□ -2.73
IPI1P38803 YJL150WYJL150W 303 nt-2.02□□□□□ -2.73
IPI1P38803 snR65snR65 100 nt-2.04□□□□□ -2.74
IPI1P38803 YBR126W-BYBR126W-B 144 nt-2.05□□□□□ -2.74
IPI1P38803 YNL198CYNL198C 303 nt-2.07□□□□□ -2.74
IPI1P38803 YBR109W-AYBR109W-A 225 nt-2.11□□□□□ -2.75
IPI1P38803 snR80snR80 171 nt-2.12□□□□□ -2.75
IPI1P38803 SOM1YEL059C-A 225 nt-2.16□□□□□ -2.76
IPI1P38803 snR56snR56 88 nt-2.17□□□□□ -2.76
IPI1P38803 YBL053WYBL053W 375 nt-2.17□□□□□ -2.76
IPI1P38803 RPL41AYDL184C 78 nt-2.2□□□□□ -2.76
IPI1P38803 YBR296C-AYBR296C-A 120 nt-2.2□□□□□ -2.76
IPI1P38803 snR38snR38 95 nt-2.22□□□□□ -2.76
IPI1P38803 snR6snR6 112 nt-2.24□□□□□ -2.77
IPI1P38803 YDR524W-CYDR524W-C 90 nt-2.25□□□□□ -2.77
IPI1P38803 YCR095W-AYCR095W-A 159 nt-2.3□□□□□ -2.78
IPI1P38803 YOR231C-AYOR231C-A 201 nt-2.3□□□□□ -2.78
IPI1P38803 YOL083C-AYOL083C-A 141 nt-2.31□□□□□ -2.78
IPI1P38803 YDR406W-AYDR406W-A 246 nt-2.33□□□□□ -2.78
IPI1P38803 YBL071C-BYBL071C-B 99 nt-2.35□□□□□ -2.79
IPI1P38803 YHR175W-AYHR175W-A 150 nt-2.37□□□□□ -2.79
IPI1P38803 YOR335W-AYOR335W-A 81 nt-2.37□□□□□ -2.79
IPI1P38803 YGR151CYGR151C 336 nt-2.38□□□□□ -2.79
IPI1P38803 snR73snR73 106 nt-2.4□□□□□ -2.79
IPI1P38803 YOL164W-AYOL164W-A 183 nt-2.4□□□□□ -2.79
IPI1P38803 tR(ACG)Q2tR(ACG)Q2 74 nt-2.46□□□□□ -2.8
IPI1P38803 Q0144Q0144 330 nt-2.47□□□□□ -2.8
IPI1P38803 snR47snR47 99 nt-2.47□□□□□ -2.8
IPI1P38803 RPL41BYDL133C-A 78 nt-2.51□□□□□ -2.81
IPI1P38803 YAL037C-AYAL037C-A 93 nt-2.6□□□□□ -2.83
IPI1P38803 tV(UAC)QtV(UAC)Q 76 nt-2.65□□□□□ -2.83
IPI1P38803 YCL001W-BYCL001W-B 255 nt-2.66□□□□□ -2.84
IPI1P38803 YBL100W-CYBL100W-C 120 nt-2.67□□□□□ -2.84
IPI1P38803 YDL114W-AYDL114W-A 114 nt-2.68□□□□□ -2.84
IPI1P38803 tS(GCU)Q1tS(GCU)Q1 86 nt-2.69□□□□□ -2.84
IPI1P38803 YKL225WYKL225W 348 nt-2.69□□□□□ -2.84
IPI1P38803 snR85snR85 171 nt-2.75□□□□□ -2.85
IPI1P38803 SPG3YDR504C 384 nt-2.77□□□□□ -2.85
IPI1P38803 YDR543CYDR543C 300 nt-2.77□□□□□ -2.85
IPI1P38803 YMR046W-AYMR046W-A 129 nt-2.79□□□□□ -2.86
IPI1P38803 YDR524C-AYDR524C-A 120 nt-2.8□□□□□ -2.86
IPI1P38803 YNL337WYNL337W 255 nt-2.9□□□□□ -2.87
IPI1P38803 YDL159W-AYDL159W-A 132 nt-2.97□□□□□ -2.88
IPI1P38803 YLR466C-BYLR466C-B 117 nt-2.97□□□□□ -2.88
IPI1P38803 YNL338WYNL338W 159 nt-3.02□□□□□ -2.89
IPI1P38803 YGR122C-AYGR122C-A 129 nt-3.04□□□□□ -2.9
IPI1P38803 YDR034C-AYDR034C-A 177 nt-3.05□□□□□ -2.9
IPI1P38803 snR87snR87 109 nt-3.07□□□□□ -2.9
IPI1P38803 YGL007C-AYGL007C-A 87 nt-3.13□□□□□ -2.91
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms