Protein–RNA interactions for Protein: P38324

SLX1, Structure-specific endonuclease subunit SLX1, yeastyeast

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX1P38324 EMC5YIL027C 426 nt1.07□□□□□ -2.24
SLX1P38324 snR14snR14 160 nt1.07□□□□□ -2.24
SLX1P38324 YBR196C-AYBR196C-A 150 nt1.07□□□□□ -2.24
SLX1P38324 YNL054W-BYNL054W-B 5250 nt1.07□□□□□ -2.24
SLX1P38324 ENV11YGR071C 2583 nt1.06□□□□□ -2.24
SLX1P38324 NUP145YGL092W 3954 nt1.06□□□□□ -2.24
SLX1P38324 IFH1YLR223C 3258 nt1.05□□□□□ -2.24
SLX1P38324 YKL096C-BYKL096C-B 150 nt1.05□□□□□ -2.24
SLX1P38324 snR38snR38 95 nt1.05□□□□□ -2.24
SLX1P38324 YGR122C-AYGR122C-A 129 nt1.04□□□□□ -2.24
SLX1P38324 NUP120YKL057C 3114 nt1.04□□□□□ -2.24
SLX1P38324 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
SLX1P38324 PET111YMR257C 2403 nt1.02□□□□□ -2.25
SLX1P38324 SLI15YBR156C 2097 nt1.02□□□□□ -2.25
SLX1P38324 YML054C-AYML054C-A 159 nt1.01□□□□□ -2.25
SLX1P38324 NUP188YML103C 4968 nt1.01□□□□□ -2.25
SLX1P38324 DOP1YDR141C 5097 nt1□□□□□ -2.25
SLX1P38324 AI1Q0050 2505 nt1□□□□□ -2.25
SLX1P38324 APL3YBL037W 3078 nt1□□□□□ -2.25
SLX1P38324 RPL26BYGR034W 384 nt1□□□□□ -2.25
SLX1P38324 YLR041WYLR041W 321 nt1□□□□□ -2.25
SLX1P38324 SEC10YLR166C 2616 nt0.98□□□□□ -2.25
SLX1P38324 YBR200W-AYBR200W-A 165 nt0.98□□□□□ -2.25
SLX1P38324 NNF2YGR089W 2811 nt0.98□□□□□ -2.25
SLX1P38324 SKI7YOR076C 2244 nt0.97□□□□□ -2.25
SLX1P38324 BEM2YER155C 6504 nt0.97□□□□□ -2.25
SLX1P38324 STO1YMR125W 2586 nt0.95□□□□□ -2.26
SLX1P38324 YGR146C-AYGR146C-A 162 nt0.95□□□□□ -2.26
SLX1P38324 EST1YLR233C 2100 nt0.95□□□□□ -2.26
SLX1P38324 SWI4YER111C 3282 nt0.95□□□□□ -2.26
SLX1P38324 YMR160WYMR160W 2451 nt0.94□□□□□ -2.26
SLX1P38324 YLR299C-AYLR299C-A 93 nt0.94□□□□□ -2.26
SLX1P38324 YOL014WYOL014W 375 nt0.94□□□□□ -2.26
SLX1P38324 YDL073WYDL073W 2955 nt0.93□□□□□ -2.26
SLX1P38324 RPL41AYDL184C 78 nt0.93□□□□□ -2.26
SLX1P38324 tN(GUU)QtN(GUU)Q 71 nt0.93□□□□□ -2.26
SLX1P38324 tD(GUC)QtD(GUC)Q 75 nt0.92□□□□□ -2.26
SLX1P38324 WAR1YML076C 2835 nt0.92□□□□□ -2.26
SLX1P38324 YHR180C-BYHR180C-B 105 nt0.91□□□□□ -2.26
SLX1P38324 snR190snR190 190 nt0.91□□□□□ -2.26
SLX1P38324 YDL159C-BYDL159C-B 177 nt0.9□□□□□ -2.27
SLX1P38324 YPR160W-AYPR160W-A 81 nt0.88□□□□□ -2.27
SLX1P38324 NIP1YMR309C 2439 nt0.87□□□□□ -2.27
SLX1P38324 NUT1YGL151W 3399 nt0.87□□□□□ -2.27
SLX1P38324 snR69snR69 101 nt0.86□□□□□ -2.27
SLX1P38324 RDS3YPR094W 324 nt0.86□□□□□ -2.27
SLX1P38324 YBR296C-AYBR296C-A 120 nt0.86□□□□□ -2.27
SLX1P38324 CSE1YGL238W 2883 nt0.85□□□□□ -2.27
SLX1P38324 RKR1YMR247C 4689 nt0.85□□□□□ -2.27
SLX1P38324 CDC39YCR093W 6327 nt0.84□□□□□ -2.27
SLX1P38324 YKL100W-AYKL100W-A 90 nt0.83□□□□□ -2.28
SLX1P38324 PRP16YKR086W 3216 nt0.83□□□□□ -2.28
SLX1P38324 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
SLX1P38324 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
SLX1P38324 YKL145W-AYKL145W-A 93 nt0.81□□□□□ -2.28
SLX1P38324 YOR376W-AYOR376W-A 156 nt0.81□□□□□ -2.28
SLX1P38324 ULP2YIL031W 3105 nt0.8□□□□□ -2.28
SLX1P38324 ALY2YJL084C 3141 nt0.8□□□□□ -2.28
SLX1P38324 BUL2YML111W 2763 nt0.8□□□□□ -2.28
SLX1P38324 tQ(UUG)QtQ(UUG)Q 76 nt0.79□□□□□ -2.28
SLX1P38324 snR40snR40 97 nt0.77□□□□□ -2.29
SLX1P38324 RPM2YML091C 3609 nt0.73□□□□□ -2.29
SLX1P38324 PAN2YGL094C 3348 nt0.72□□□□□ -2.29
SLX1P38324 YDL114W-AYDL114W-A 114 nt0.72□□□□□ -2.29
SLX1P38324 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
SLX1P38324 FMP27YLR454W 7887 nt0.71□□□□□ -2.3
SLX1P38324 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
SLX1P38324 SEC8YPR055W 3198 nt0.69□□□□□ -2.3
SLX1P38324 tV(UAC)QtV(UAC)Q 76 nt0.69□□□□□ -2.3
SLX1P38324 YLL006W-AYLL006W-A 177 nt0.69□□□□□ -2.3
SLX1P38324 IQG1YPL242C 4488 nt0.68□□□□□ -2.3
SLX1P38324 LTE1YAL024C 4308 nt0.67□□□□□ -2.3
SLX1P38324 YER090C-AYER090C-A 90 nt0.64□□□□□ -2.31
SLX1P38324 YKL106C-AYKL106C-A 120 nt0.64□□□□□ -2.31
SLX1P38324 SOV1YMR066W 2697 nt0.61□□□□□ -2.31
SLX1P38324 YSP1YHR155W 3687 nt0.61□□□□□ -2.31
SLX1P38324 YPL060C-AYPL060C-A 3315 nt0.6□□□□□ -2.31
SLX1P38324 snR67snR67 82 nt0.6□□□□□ -2.31
SLX1P38324 YBL100W-BYBL100W-B 5313 nt0.58□□□□□ -2.32
SLX1P38324 YLR399W-AYLR399W-A 105 nt0.58□□□□□ -2.32
SLX1P38324 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
SLX1P38324 YJL077W-AYJL077W-A 87 nt0.55□□□□□ -2.32
SLX1P38324 snR77snR77 88 nt0.53□□□□□ -2.32
SLX1P38324 PAU9YBL108C-A 129 nt0.42□□□□□ -2.34
SLX1P38324 YOR335W-AYOR335W-A 81 nt0.41□□□□□ -2.34
SLX1P38324 YOR316C-AYOR316C-A 210 nt0.4□□□□□ -2.35
SLX1P38324 SBH2YER019C-A 267 nt0.39□□□□□ -2.35
SLX1P38324 YML100W-AYML100W-A 174 nt0.36□□□□□ -2.35
SLX1P38324 snR6snR6 112 nt0.31□□□□□ -2.36
SLX1P38324 ESP1YGR098C 4893 nt0.3□□□□□ -2.36
SLX1P38324 MLP1YKR095W 5628 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms