Protein–RNA interactions for Protein: P37366

CCL1, Cyclin CCL1, yeastyeast

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCL1P37366 YKL145W-AYKL145W-A 93 nt0.8□□□□□ -2.28
CCL1P37366 YNL266WYNL266W 420 nt0.8□□□□□ -2.28
CCL1P37366 BUL2YML111W 2763 nt0.79□□□□□ -2.28
CCL1P37366 NIP1YMR309C 2439 nt0.78□□□□□ -2.28
CCL1P37366 CSE1YGL238W 2883 nt0.78□□□□□ -2.29
CCL1P37366 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
CCL1P37366 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
CCL1P37366 YBR178WYBR178W 375 nt0.76□□□□□ -2.29
CCL1P37366 snR61snR61 90 nt0.75□□□□□ -2.29
CCL1P37366 PET111YMR257C 2403 nt0.75□□□□□ -2.29
CCL1P37366 TFB5YDR079C-A 219 nt0.74□□□□□ -2.29
CCL1P37366 LTE1YAL024C 4308 nt0.74□□□□□ -2.29
CCL1P37366 RPS26AYGL189C 360 nt0.73□□□□□ -2.29
CCL1P37366 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
CCL1P37366 YDR371C-AYDR371C-A 105 nt0.72□□□□□ -2.29
CCL1P37366 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
CCL1P37366 YPL060C-AYPL060C-A 3315 nt0.71□□□□□ -2.3
CCL1P37366 SEC10YLR166C 2616 nt0.7□□□□□ -2.3
CCL1P37366 EST1YLR233C 2100 nt0.68□□□□□ -2.3
CCL1P37366 YBL109WYBL109W 336 nt0.68□□□□□ -2.3
CCL1P37366 ORC3YLL004W 1851 nt0.67□□□□□ -2.3
CCL1P37366 snR69snR69 101 nt0.67□□□□□ -2.3
CCL1P37366 YGL041C-BYGL041C-B 183 nt0.67□□□□□ -2.3
CCL1P37366 YBR196C-AYBR196C-A 150 nt0.67□□□□□ -2.3
CCL1P37366 YMR326CYMR326C 309 nt0.64□□□□□ -2.31
CCL1P37366 tD(GUC)QtD(GUC)Q 75 nt0.63□□□□□ -2.31
CCL1P37366 YDR524C-AYDR524C-A 120 nt0.63□□□□□ -2.31
CCL1P37366 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
CCL1P37366 SBH1YER087C-B 249 nt0.61□□□□□ -2.31
CCL1P37366 snR81snR81 201 nt0.59□□□□□ -2.31
CCL1P37366 YJL077W-AYJL077W-A 87 nt0.59□□□□□ -2.31
CCL1P37366 RDS3YPR094W 324 nt0.58□□□□□ -2.32
CCL1P37366 YBL100W-BYBL100W-B 5313 nt0.57□□□□□ -2.32
CCL1P37366 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
CCL1P37366 YHR217CYHR217C 462 nt0.57□□□□□ -2.32
CCL1P37366 YAL037C-AYAL037C-A 93 nt0.57□□□□□ -2.32
CCL1P37366 YLR286W-AYLR286W-A 135 nt0.57□□□□□ -2.32
CCL1P37366 YNL054W-BYNL054W-B 5250 nt0.56□□□□□ -2.32
CCL1P37366 MLP1YKR095W 5628 nt0.56□□□□□ -2.32
CCL1P37366 AI1Q0050 2505 nt0.56□□□□□ -2.32
CCL1P37366 YOL083C-AYOL083C-A 141 nt0.56□□□□□ -2.32
CCL1P37366 YDL159C-BYDL159C-B 177 nt0.52□□□□□ -2.33
CCL1P37366 tQ(UUG)QtQ(UUG)Q 76 nt0.52□□□□□ -2.33
CCL1P37366 YBL071C-BYBL071C-B 99 nt0.51□□□□□ -2.33
CCL1P37366 YLR299C-AYLR299C-A 93 nt0.48□□□□□ -2.33
CCL1P37366 YOR186C-AYOR186C-A 210 nt0.44□□□□□ -2.34
CCL1P37366 IQG1YPL242C 4488 nt0.43□□□□□ -2.34
CCL1P37366 tS(GCU)Q1tS(GCU)Q1 86 nt0.43□□□□□ -2.34
CCL1P37366 YER078W-AYER078W-A 165 nt0.4□□□□□ -2.35
CCL1P37366 YER090C-AYER090C-A 90 nt0.4□□□□□ -2.35
CCL1P37366 YOL164W-AYOL164W-A 183 nt0.4□□□□□ -2.35
CCL1P37366 snR50snR50 90 nt0.4□□□□□ -2.35
CCL1P37366 YBL100W-CYBL100W-C 120 nt0.34□□□□□ -2.36
CCL1P37366 ESP1YGR098C 4893 nt0.33□□□□□ -2.36
CCL1P37366 YDL247W-AYDL247W-A 75 nt0.33□□□□□ -2.36
CCL1P37366 YML054C-AYML054C-A 159 nt0.33□□□□□ -2.36
CCL1P37366 YGR240C-AYGR240C-A 201 nt0.32□□□□□ -2.36
CCL1P37366 SOV1YMR066W 2697 nt0.32□□□□□ -2.36
CCL1P37366 snR62snR62 100 nt0.31□□□□□ -2.36
CCL1P37366 THO2YNL139C 4794 nt0.3□□□□□ -2.36
CCL1P37366 YHR180C-BYHR180C-B 105 nt0.29□□□□□ -2.36
CCL1P37366 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
CCL1P37366 snR47snR47 99 nt0.29□□□□□ -2.36
CCL1P37366 MLP2YIL149C 5040 nt0.27□□□□□ -2.37
CCL1P37366 snR67snR67 82 nt0.22□□□□□ -2.37
CCL1P37366 YDR034C-AYDR034C-A 177 nt0.22□□□□□ -2.37
CCL1P37366 YLL066W-BYLL066W-B 171 nt0.22□□□□□ -2.37
CCL1P37366 snR45snR45 172 nt0.22□□□□□ -2.37
CCL1P37366 YML100W-AYML100W-A 174 nt0.18□□□□□ -2.38
CCL1P37366 snR128snR128 126 nt0.17□□□□□ -2.38
CCL1P37366 YBR109W-AYBR109W-A 225 nt0.17□□□□□ -2.38
CCL1P37366 RPL41AYDL184C 78 nt0.15□□□□□ -2.39
CCL1P37366 YBR296C-AYBR296C-A 120 nt0.13□□□□□ -2.39
CCL1P37366 snR38snR38 95 nt0.08□□□□□ -2.4
CCL1P37366 SKI7YOR076C 2244 nt0.05□□□□□ -2.4
CCL1P37366 YKL225WYKL225W 348 nt0.03□□□□□ -2.4
CCL1P37366 PAU9YBL108C-A 129 nt-0.02□□□□□ -2.41
CCL1P37366 snR64snR64 101 nt-0.07□□□□□ -2.42
CCL1P37366 tA(UGC)QtA(UGC)Q 76 nt-0.14□□□□□ -2.43
CCL1P37366 SBH2YER019C-A 267 nt-0.17□□□□□ -2.44
CCL1P37366 YKL106C-AYKL106C-A 120 nt-0.18□□□□□ -2.44
CCL1P37366 snR53snR53 91 nt-0.24□□□□□ -2.45
CCL1P37366 YOR376W-AYOR376W-A 156 nt-0.25□□□□□ -2.45
CCL1P37366 YDL159W-AYDL159W-A 132 nt-0.26□□□□□ -2.45
CCL1P37366 YGR122C-AYGR122C-A 129 nt-0.33□□□□□ -2.46
CCL1P37366 YJL113WYJL113W 4647 nt-0.35□□□□□ -2.47
CCL1P37366 YOR316C-AYOR316C-A 210 nt-0.38□□□□□ -2.47
CCL1P37366 snR161snR161 161 nt-0.38□□□□□ -2.47
CCL1P37366 YDL114W-AYDL114W-A 114 nt-0.49□□□□□ -2.49
CCL1P37366 snR77snR77 88 nt-0.54□□□□□ -2.5
CCL1P37366 tV(UAC)QtV(UAC)Q 76 nt-0.55□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms