Protein–RNA interactions for Protein: P37291

SHM2, Serine hydroxymethyltransferase, cytosolic, yeastyeast

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM2P37291 snR38snR38 95 nt1.34□□□□□ -2.19
SHM2P37291 YPL060C-AYPL060C-A 3315 nt1.33□□□□□ -2.2
SHM2P37291 CAT8YMR280C 4302 nt1.33□□□□□ -2.2
SHM2P37291 YBR296C-AYBR296C-A 120 nt1.32□□□□□ -2.2
SHM2P37291 AI1Q0050 2505 nt1.32□□□□□ -2.2
SHM2P37291 CDC39YCR093W 6327 nt1.3□□□□□ -2.2
SHM2P37291 HUG1YML058W-A 207 nt1.3□□□□□ -2.2
SHM2P37291 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
SHM2P37291 SKI7YOR076C 2244 nt1.29□□□□□ -2.2
SHM2P37291 NST1YNL091W 3723 nt1.29□□□□□ -2.2
SHM2P37291 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
SHM2P37291 NIP1YMR309C 2439 nt1.26□□□□□ -2.21
SHM2P37291 PAU12YGR294W 363 nt1.26□□□□□ -2.21
SHM2P37291 YGR122C-AYGR122C-A 129 nt1.25□□□□□ -2.21
SHM2P37291 LAA1YJL207C 6045 nt1.23□□□□□ -2.21
SHM2P37291 SIP4YJL089W 2490 nt1.23□□□□□ -2.21
SHM2P37291 YJL077W-AYJL077W-A 87 nt1.23□□□□□ -2.21
SHM2P37291 BUL2YML111W 2763 nt1.23□□□□□ -2.21
SHM2P37291 YLL006W-AYLL006W-A 177 nt1.22□□□□□ -2.21
SHM2P37291 MYO1YHR023W 5787 nt1.18□□□□□ -2.22
SHM2P37291 tQ(UUG)QtQ(UUG)Q 76 nt1.18□□□□□ -2.22
SHM2P37291 YNL054W-BYNL054W-B 5250 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
SHM2P37291 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
SHM2P37291 YGR130CYGR130C 2451 nt1.14□□□□□ -2.23
SHM2P37291 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
SHM2P37291 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
SHM2P37291 YER090C-AYER090C-A 90 nt1.09□□□□□ -2.23
SHM2P37291 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
SHM2P37291 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
SHM2P37291 PET111YMR257C 2403 nt1.07□□□□□ -2.24
SHM2P37291 IML1YJR138W 4755 nt1.07□□□□□ -2.24
SHM2P37291 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SHM2P37291 SCC2YDR180W 4482 nt1.06□□□□□ -2.24
SHM2P37291 YOR192C-BYOR192C-B 5313 nt1.03□□□□□ -2.24
SHM2P37291 RKR1YMR247C 4689 nt1.03□□□□□ -2.24
SHM2P37291 tV(UAC)BtV(UAC)B 74 nt1.01□□□□□ -2.25
SHM2P37291 tV(UAC)DtV(UAC)D 74 nt1.01□□□□□ -2.25
SHM2P37291 YPR117WYPR117W 7470 nt0.98□□□□□ -2.25
SHM2P37291 snR67snR67 82 nt0.98□□□□□ -2.25
SHM2P37291 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
SHM2P37291 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
SHM2P37291 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
SHM2P37291 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
SHM2P37291 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
SHM2P37291 BEM2YER155C 6504 nt0.93□□□□□ -2.26
SHM2P37291 DOP1YDR141C 5097 nt0.93□□□□□ -2.26
SHM2P37291 LTE1YAL024C 4308 nt0.87□□□□□ -2.27
SHM2P37291 YDL114W-AYDL114W-A 114 nt0.86□□□□□ -2.27
SHM2P37291 YKL106C-AYKL106C-A 120 nt0.85□□□□□ -2.27
SHM2P37291 YMR160WYMR160W 2451 nt0.85□□□□□ -2.27
SHM2P37291 PAU24YBR301W 363 nt0.83□□□□□ -2.28
SHM2P37291 YBL100W-BYBL100W-B 5313 nt0.81□□□□□ -2.28
SHM2P37291 tV(UAC)QtV(UAC)Q 76 nt0.79□□□□□ -2.28
SHM2P37291 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
SHM2P37291 YOR376W-AYOR376W-A 156 nt0.75□□□□□ -2.29
SHM2P37291 MLP2YIL149C 5040 nt0.73□□□□□ -2.29
SHM2P37291 MLP1YKR095W 5628 nt0.69□□□□□ -2.3
SHM2P37291 UTP20YBL004W 7482 nt0.66□□□□□ -2.3
SHM2P37291 YML100W-AYML100W-A 174 nt0.64□□□□□ -2.31
SHM2P37291 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SHM2P37291 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SHM2P37291 YOR186C-AYOR186C-A 210 nt0.61□□□□□ -2.31
SHM2P37291 tF(GAA)BtF(GAA)B 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)FtF(GAA)F 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)GtF(GAA)G 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)H1tF(GAA)H1 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)H2tF(GAA)H2 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)MtF(GAA)M 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)P1tF(GAA)P1 73 nt0.6□□□□□ -2.31
SHM2P37291 tF(GAA)P2tF(GAA)P2 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
SHM2P37291 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
SHM2P37291 snR40snR40 97 nt0.6□□□□□ -2.31
SHM2P37291 THO2YNL139C 4794 nt0.58□□□□□ -2.32
SHM2P37291 YOR316C-AYOR316C-A 210 nt0.57□□□□□ -2.32
SHM2P37291 snR77snR77 88 nt0.56□□□□□ -2.32
SHM2P37291 IQG1YPL242C 4488 nt0.54□□□□□ -2.32
SHM2P37291 SBH2YER019C-A 267 nt0.51□□□□□ -2.33
SHM2P37291 SOV1YMR066W 2697 nt0.51□□□□□ -2.33
SHM2P37291 YKL145W-AYKL145W-A 93 nt0.48□□□□□ -2.33
SHM2P37291 FMP27YLR454W 7887 nt0.46□□□□□ -2.34
SHM2P37291 YOL014WYOL014W 375 nt0.44□□□□□ -2.34
SHM2P37291 ESP1YGR098C 4893 nt0.43□□□□□ -2.34
SHM2P37291 PAU9YBL108C-A 129 nt0.41□□□□□ -2.34
SHM2P37291 snR128snR128 126 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms