Protein–RNA interactions for Protein: P32558

SPT16, FACT complex subunit SPT16, yeastyeast

Known RBP Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT16P32558 VPS15YBR097W 4365 nt1.83□□□□□ -2.12
SPT16P32558 NUP188YML103C 4968 nt1.83□□□□□ -2.12
SPT16P32558 PMD1YER132C 5262 nt1.82□□□□□ -2.12
SPT16P32558 tQ(UUG)QtQ(UUG)Q 76 nt1.79□□□□□ -2.12
SPT16P32558 YNL054W-BYNL054W-B 5250 nt1.78□□□□□ -2.12
SPT16P32558 YLL006W-AYLL006W-A 177 nt1.78□□□□□ -2.12
SPT16P32558 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
SPT16P32558 CAT8YMR280C 4302 nt1.78□□□□□ -2.12
SPT16P32558 NUP192YJL039C 5052 nt1.78□□□□□ -2.13
SPT16P32558 LAA1YJL207C 6045 nt1.76□□□□□ -2.13
SPT16P32558 YER090C-AYER090C-A 90 nt1.76□□□□□ -2.13
SPT16P32558 FYV8YGR196C 2454 nt1.76□□□□□ -2.13
SPT16P32558 MEC1YBR136W 7107 nt1.74□□□□□ -2.13
SPT16P32558 SSK2YNR031C 4740 nt1.74□□□□□ -2.13
SPT16P32558 CLU1YMR012W 3834 nt1.73□□□□□ -2.13
SPT16P32558 BST1YFL025C 3090 nt1.72□□□□□ -2.13
SPT16P32558 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
SPT16P32558 IRA1YBR140C 9279 nt1.71□□□□□ -2.14
SPT16P32558 HKR1YDR420W 5409 nt1.69□□□□□ -2.14
SPT16P32558 YOR376W-AYOR376W-A 156 nt1.67□□□□□ -2.14
SPT16P32558 SPT7YBR081C 3999 nt1.65□□□□□ -2.15
SPT16P32558 YGR130CYGR130C 2451 nt1.65□□□□□ -2.15
SPT16P32558 YDL114W-AYDL114W-A 114 nt1.61□□□□□ -2.15
SPT16P32558 tV(UAC)QtV(UAC)Q 76 nt1.6□□□□□ -2.15
SPT16P32558 BRR2YER172C 6492 nt1.59□□□□□ -2.15
SPT16P32558 MYO1YHR023W 5787 nt1.58□□□□□ -2.16
SPT16P32558 snR67snR67 82 nt1.58□□□□□ -2.16
SPT16P32558 CCH1YGR217W 6120 nt1.57□□□□□ -2.16
SPT16P32558 YNL284C-BYNL284C-B 5268 nt1.54□□□□□ -2.16
SPT16P32558 tQ(UUG)E2tQ(UUG)E2 72 nt1.52□□□□□ -2.17
SPT16P32558 MLP2YIL149C 5040 nt1.5□□□□□ -2.17
SPT16P32558 YKL106C-AYKL106C-A 120 nt1.49□□□□□ -2.17
SPT16P32558 VAM6YDL077C 3150 nt1.49□□□□□ -2.17
SPT16P32558 YPR117WYPR117W 7470 nt1.45□□□□□ -2.18
SPT16P32558 YMR160WYMR160W 2451 nt1.43□□□□□ -2.18
SPT16P32558 snR40snR40 97 nt1.42□□□□□ -2.18
SPT16P32558 YOR192C-BYOR192C-B 5313 nt1.4□□□□□ -2.19
SPT16P32558 RKR1YMR247C 4689 nt1.37□□□□□ -2.19
SPT16P32558 IML1YJR138W 4755 nt1.35□□□□□ -2.19
SPT16P32558 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
SPT16P32558 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
SPT16P32558 BUD3YCL014W 4911 nt1.3□□□□□ -2.2
SPT16P32558 SCC2YDR180W 4482 nt1.27□□□□□ -2.21
SPT16P32558 DOP1YDR141C 5097 nt1.26□□□□□ -2.21
SPT16P32558 tV(UAC)BtV(UAC)B 74 nt1.25□□□□□ -2.21
SPT16P32558 tV(UAC)DtV(UAC)D 74 nt1.25□□□□□ -2.21
SPT16P32558 YBL100W-BYBL100W-B 5313 nt1.25□□□□□ -2.21
SPT16P32558 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
SPT16P32558 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
SPT16P32558 EMT1tM(CAU)D 73 nt1.2□□□□□ -2.22
SPT16P32558 EMT5tM(CAU)J1 73 nt1.2□□□□□ -2.22
SPT16P32558 EMT3tM(CAU)J2 73 nt1.2□□□□□ -2.22
SPT16P32558 EMT4tM(CAU)M 73 nt1.2□□□□□ -2.22
SPT16P32558 EMT2tM(CAU)O2 73 nt1.2□□□□□ -2.22
SPT16P32558 LTE1YAL024C 4308 nt1.2□□□□□ -2.22
SPT16P32558 PAU24YBR301W 363 nt1.19□□□□□ -2.22
SPT16P32558 snR77snR77 88 nt1.15□□□□□ -2.23
SPT16P32558 YOR316C-AYOR316C-A 210 nt1.15□□□□□ -2.23
SPT16P32558 BEM2YER155C 6504 nt1.1□□□□□ -2.23
SPT16P32558 YML100W-AYML100W-A 174 nt1.08□□□□□ -2.24
SPT16P32558 SBH2YER019C-A 267 nt1.03□□□□□ -2.24
SPT16P32558 SOV1YMR066W 2697 nt1.02□□□□□ -2.25
SPT16P32558 MLP1YKR095W 5628 nt0.98□□□□□ -2.25
SPT16P32558 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
SPT16P32558 UTP20YBL004W 7482 nt0.95□□□□□ -2.26
SPT16P32558 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
SPT16P32558 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
SPT16P32558 YOR186C-AYOR186C-A 210 nt0.89□□□□□ -2.27
SPT16P32558 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
SPT16P32558 ESP1YGR098C 4893 nt0.83□□□□□ -2.28
SPT16P32558 YOL014WYOL014W 375 nt0.8□□□□□ -2.28
SPT16P32558 YJL113WYJL113W 4647 nt0.78□□□□□ -2.28
SPT16P32558 THO2YNL139C 4794 nt0.76□□□□□ -2.29
SPT16P32558 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
SPT16P32558 FMP27YLR454W 7887 nt0.75□□□□□ -2.29
SPT16P32558 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
SPT16P32558 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
SPT16P32558 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
SPT16P32558 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SPT16P32558 PAU9YBL108C-A 129 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 788.8 ms