Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.22■□□□□ 0.35
CD40P25942 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.21■□□□□ 0.35
CD40P25942 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 KRT16P6-202ENST00000425692 1426 ntBASIC17.21■□□□□ 0.35
CD40P25942 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.21■□□□□ 0.35
CD40P25942 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.21■□□□□ 0.35
CD40P25942 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.21■□□□□ 0.35
CD40P25942 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 NBPF21P-201ENST00000425093 1451 ntBASIC17.21■□□□□ 0.35
CD40P25942 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CD40P25942 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.21■□□□□ 0.35
CD40P25942 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.21■□□□□ 0.35
CD40P25942 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.21■□□□□ 0.35
CD40P25942 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 AL137060.1-201ENST00000618151 2648 ntBASIC17.21■□□□□ 0.35
CD40P25942 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CD40P25942 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD40P25942 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD40P25942 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD40P25942 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD40P25942 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.2■□□□□ 0.34
CD40P25942 AC012618.2-201ENST00000428058 849 ntBASIC17.2■□□□□ 0.34
CD40P25942 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CD40P25942 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CD40P25942 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.2■□□□□ 0.34
CD40P25942 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.2■□□□□ 0.34
CD40P25942 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 AL135905.2-201ENST00000584934 1404 ntBASIC17.2■□□□□ 0.34
CD40P25942 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD40P25942 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.2■□□□□ 0.34
CD40P25942 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.19■□□□□ 0.34
CD40P25942 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CD40P25942 RPS2P55-201ENST00000397318 883 ntBASIC17.19■□□□□ 0.34
CD40P25942 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 AC107956.1-201ENST00000494359 873 ntBASIC17.19■□□□□ 0.34
CD40P25942 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.19■□□□□ 0.34
CD40P25942 AC233702.5-201ENST00000584107 538 ntBASIC17.19■□□□□ 0.34
CD40P25942 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.19■□□□□ 0.34
CD40P25942 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.19■□□□□ 0.34
CD40P25942 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.19■□□□□ 0.34
CD40P25942 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD40P25942 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 SMG8-203ENST00000578922 2178 ntBASIC17.18■□□□□ 0.34
CD40P25942 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CD40P25942 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.18■□□□□ 0.34
CD40P25942 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CD40P25942 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD40P25942 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CD40P25942 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.18■□□□□ 0.34
CD40P25942 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.18■□□□□ 0.34
CD40P25942 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CD40P25942 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms