Protein–RNA interactions for Protein: P25046

ROX3, Mediator of RNA polymerase II transcription subunit 19, yeastyeast

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROX3P25046 YKL063CYKL063C 504 nt-2.36□□□□□ -2.79
ROX3P25046 YOL083C-AYOL083C-A 141 nt-2.36□□□□□ -2.79
ROX3P25046 tW(UCA)QtW(UCA)Q 74 nt-2.37□□□□□ -2.79
ROX3P25046 YLR406C-AYLR406C-A 150 nt-2.38□□□□□ -2.79
ROX3P25046 YMR001C-AYMR001C-A 231 nt-2.38□□□□□ -2.79
ROX3P25046 ATP19YOL077W-A 207 nt-2.39□□□□□ -2.79
ROX3P25046 YOR381W-AYOR381W-A 168 nt-2.41□□□□□ -2.8
ROX3P25046 YLR342W-AYLR342W-A 174 nt-2.42□□□□□ -2.8
ROX3P25046 BIL1YOR304C-A 231 nt-2.42□□□□□ -2.8
ROX3P25046 YJR157WYJR157W 363 nt-2.43□□□□□ -2.8
ROX3P25046 YGL041CYGL041C 204 nt-2.44□□□□□ -2.8
ROX3P25046 YBR196C-AYBR196C-A 150 nt-2.46□□□□□ -2.8
ROX3P25046 Q0142Q0142 177 nt-2.47□□□□□ -2.8
ROX3P25046 YLR120W-AYLR120W-A 102 nt-2.48□□□□□ -2.81
ROX3P25046 YEL014CYEL014C 306 nt-2.49□□□□□ -2.81
ROX3P25046 HTL1YCR020W-B 237 nt-2.5□□□□□ -2.81
ROX3P25046 YOR316C-AYOR316C-A 210 nt-2.52□□□□□ -2.81
ROX3P25046 YOR329W-AYOR329W-A 210 nt-2.53□□□□□ -2.81
ROX3P25046 YLR299C-AYLR299C-A 93 nt-2.54□□□□□ -2.82
ROX3P25046 YPR197CYPR197C 564 nt-2.55□□□□□ -2.82
ROX3P25046 YAL016C-BYAL016C-B 186 nt-2.57□□□□□ -2.82
ROX3P25046 YPR012WYPR012W 255 nt-2.57□□□□□ -2.82
ROX3P25046 snR78snR78 87 nt-2.58□□□□□ -2.82
ROX3P25046 YOL013W-BYOL013W-B 291 nt-2.59□□□□□ -2.82
ROX3P25046 YHR180C-BYHR180C-B 105 nt-2.62□□□□□ -2.83
ROX3P25046 YLR222C-AYLR222C-A 231 nt-2.64□□□□□ -2.83
ROX3P25046 snR6snR6 112 nt-2.66□□□□□ -2.84
ROX3P25046 YKL106C-AYKL106C-A 120 nt-2.66□□□□□ -2.84
ROX3P25046 snR55snR55 98 nt-2.67□□□□□ -2.84
ROX3P25046 YAL063C-AYAL063C-A 291 nt-2.7□□□□□ -2.84
ROX3P25046 YER181CYER181C 324 nt-2.71□□□□□ -2.84
ROX3P25046 YNR025CYNR025C 360 nt-2.74□□□□□ -2.85
ROX3P25046 YOL155W-AYOL155W-A 135 nt-2.74□□□□□ -2.85
ROX3P25046 snR73snR73 106 nt-2.77□□□□□ -2.85
ROX3P25046 YGR035CYGR035C 351 nt-2.78□□□□□ -2.85
ROX3P25046 YBR131C-AYBR131C-A 90 nt-2.78□□□□□ -2.85
ROX3P25046 YDR413CYDR413C 576 nt-2.79□□□□□ -2.86
ROX3P25046 YOR335W-AYOR335W-A 81 nt-2.79□□□□□ -2.86
ROX3P25046 snR80snR80 171 nt-2.85□□□□□ -2.87
ROX3P25046 YOR102WYOR102W 351 nt-2.85□□□□□ -2.87
ROX3P25046 YDR183C-AYDR183C-A 258 nt-2.88□□□□□ -2.87
ROX3P25046 YJL150WYJL150W 303 nt-2.88□□□□□ -2.87
ROX3P25046 YGL188C-AYGL188C-A 141 nt-2.9□□□□□ -2.87
ROX3P25046 YBR109W-AYBR109W-A 225 nt-2.9□□□□□ -2.87
ROX3P25046 YDR524C-AYDR524C-A 120 nt-2.92□□□□□ -2.88
ROX3P25046 tL(UAA)QtL(UAA)Q 85 nt-2.94□□□□□ -2.88
ROX3P25046 tF(GAA)QtF(GAA)Q 75 nt-2.95□□□□□ -2.88
ROX3P25046 RPL41BYDL133C-A 78 nt-2.96□□□□□ -2.88
ROX3P25046 snR48snR48 113 nt-2.96□□□□□ -2.88
ROX3P25046 YKL118WYKL118W 312 nt-2.99□□□□□ -2.89
ROX3P25046 YPL038W-AYPL038W-A 192 nt-2.99□□□□□ -2.89
ROX3P25046 YNL097C-BYNL097C-B 123 nt-3.05□□□□□ -2.9
ROX3P25046 GIM4YEL003W 336 nt-3.06□□□□□ -2.9
ROX3P25046 tR(UCU)Q1tR(UCU)Q1 73 nt-3.07□□□□□ -2.9
ROX3P25046 YBR296C-AYBR296C-A 120 nt-3.09□□□□□ -2.9
ROX3P25046 RPL41AYDL184C 78 nt-3.12□□□□□ -2.91
ROX3P25046 snR38snR38 95 nt-3.14□□□□□ -2.91
ROX3P25046 RPL39YJL189W 156 nt-3.23□□□□□ -2.93
ROX3P25046 YNL337WYNL337W 255 nt-3.23□□□□□ -2.93
ROX3P25046 YEL050W-AYEL050W-A 192 nt-3.24□□□□□ -2.93
ROX3P25046 snR56snR56 88 nt-3.26□□□□□ -2.93
ROX3P25046 YHL015W-AYHL015W-A 84 nt-3.26□□□□□ -2.93
ROX3P25046 YJR162CYJR162C 351 nt-3.3□□□□□ -2.94
ROX3P25046 snR52snR52 92 nt-3.32□□□□□ -2.94
ROX3P25046 YDR406W-AYDR406W-A 246 nt-3.33□□□□□ -2.94
ROX3P25046 YNL198CYNL198C 303 nt-3.33□□□□□ -2.94
ROX3P25046 YNL277W-AYNL277W-A 189 nt-3.33□□□□□ -2.94
ROX3P25046 snR87snR87 109 nt-3.35□□□□□ -2.95
ROX3P25046 YOR302WYOR302W 78 nt-3.35□□□□□ -2.95
ROX3P25046 snR85snR85 171 nt-3.43□□□□□ -2.96
ROX3P25046 SOM1YEL059C-A 225 nt-3.44□□□□□ -2.96
ROX3P25046 tV(UAC)QtV(UAC)Q 76 nt-3.44□□□□□ -2.96
ROX3P25046 YDL114W-AYDL114W-A 114 nt-3.49□□□□□ -2.97
ROX3P25046 YBL071C-BYBL071C-B 99 nt-3.5□□□□□ -2.97
ROX3P25046 YDL240C-AYDL240C-A 138 nt-3.54□□□□□ -2.98
ROX3P25046 YOL164W-AYOL164W-A 183 nt-3.54□□□□□ -2.98
ROX3P25046 snR47snR47 99 nt-3.56□□□□□ -2.98
ROX3P25046 YDR157WYDR157W 402 nt-3.6□□□□□ -2.99
ROX3P25046 YGR151CYGR151C 336 nt-3.62□□□□□ -2.99
ROX3P25046 YBL053WYBL053W 375 nt-3.65□□□□□ -2.99
ROX3P25046 YCR095W-AYCR095W-A 159 nt-3.66□□□□□ -3
ROX3P25046 SPG3YDR504C 384 nt-3.71□□□□□ -3
ROX3P25046 YKL225WYKL225W 348 nt-3.77□□□□□ -3.01
ROX3P25046 YPL152W-AYPL152W-A 99 nt-3.78□□□□□ -3.01
ROX3P25046 YKL096C-BYKL096C-B 150 nt-3.8□□□□□ -3.02
ROX3P25046 YDR118W-AYDR118W-A 117 nt-3.81□□□□□ -3.02
ROX3P25046 YBL100W-CYBL100W-C 120 nt-3.83□□□□□ -3.02
ROX3P25046 tS(GCU)Q1tS(GCU)Q1 86 nt-3.84□□□□□ -3.02
ROX3P25046 YAL037C-AYAL037C-A 93 nt-3.85□□□□□ -3.03
ROX3P25046 YHR175W-AYHR175W-A 150 nt-3.9□□□□□ -3.03
ROX3P25046 snR58snR58 96 nt-3.91□□□□□ -3.04
ROX3P25046 snR65snR65 100 nt-3.96□□□□□ -3.04
ROX3P25046 YGR122C-AYGR122C-A 129 nt-4.03□□□□□ -3.05
ROX3P25046 YDL159W-AYDL159W-A 132 nt-4.04□□□□□ -3.06
ROX3P25046 YJL136W-AYJL136W-A 84 nt-4.05□□□□□ -3.06
ROX3P25046 YDR034C-AYDR034C-A 177 nt-4.07□□□□□ -3.06
ROX3P25046 Q0017Q0017 162 nt-4.1□□□□□ -3.07
ROX3P25046 YCL001W-BYCL001W-B 255 nt-4.2□□□□□ -3.08
ROX3P25046 VAR1Q0140 1197 nt-4.34□□□□□ -3.1
ROX3P25046 YNL170WYNL170W 396 nt-4.35□□□□□ -3.11
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms