Protein–RNA interactions for Protein: P23615

SPT6, Transcription elongation factor SPT6, yeastyeast

Known RBP Predictions only

Length 1,451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT6P23615 YJL150WYJL150W 303 nt-5.28□□□□□ -3.25
SPT6P23615 YBR178WYBR178W 375 nt-5.31□□□□□ -3.26
SPT6P23615 YFL019CYFL019C 354 nt-5.32□□□□□ -3.26
SPT6P23615 YFL032WYFL032W 321 nt-5.32□□□□□ -3.26
SPT6P23615 YLR406C-AYLR406C-A 150 nt-5.32□□□□□ -3.26
SPT6P23615 snR34snR34 203 nt-5.34□□□□□ -3.26
SPT6P23615 YOR335W-AYOR335W-A 81 nt-5.4□□□□□ -3.27
SPT6P23615 YJR157WYJR157W 363 nt-5.43□□□□□ -3.28
SPT6P23615 snR80snR80 171 nt-5.5□□□□□ -3.29
SPT6P23615 YHR180C-BYHR180C-B 105 nt-5.5□□□□□ -3.29
SPT6P23615 snR41snR41 95 nt-5.5□□□□□ -3.29
SPT6P23615 YKL106C-AYKL106C-A 120 nt-5.57□□□□□ -3.3
SPT6P23615 ATP6Q0085 780 nt-5.58□□□□□ -3.3
SPT6P23615 YOL013W-BYOL013W-B 291 nt-5.58□□□□□ -3.3
SPT6P23615 YOR381W-AYOR381W-A 168 nt-5.64□□□□□ -3.31
SPT6P23615 YLR299C-AYLR299C-A 93 nt-5.68□□□□□ -3.32
SPT6P23615 RPL41BYDL133C-A 78 nt-5.69□□□□□ -3.32
SPT6P23615 snR60snR60 104 nt-5.75□□□□□ -3.33
SPT6P23615 YDR413CYDR413C 576 nt-5.77□□□□□ -3.33
SPT6P23615 YAL016C-BYAL016C-B 186 nt-5.77□□□□□ -3.33
SPT6P23615 snR54snR54 86 nt-5.82□□□□□ -3.34
SPT6P23615 YNL028WYNL028W 318 nt-5.84□□□□□ -3.34
SPT6P23615 YNL324WYNL324W 396 nt-5.84□□□□□ -3.34
SPT6P23615 snR87snR87 109 nt-5.88□□□□□ -3.35
SPT6P23615 snR78snR78 87 nt-5.89□□□□□ -3.35
SPT6P23615 YJL136W-AYJL136W-A 84 nt-5.93□□□□□ -3.36
SPT6P23615 Q0255Q0255 1419 nt-5.93□□□□□ -3.36
SPT6P23615 YGL041CYGL041C 204 nt-5.94□□□□□ -3.36
SPT6P23615 YOR329W-AYOR329W-A 210 nt-5.98□□□□□ -3.37
SPT6P23615 YER006C-AYER006C-A 318 nt-6.05□□□□□ -3.38
SPT6P23615 YMR001C-AYMR001C-A 231 nt-6.08□□□□□ -3.38
SPT6P23615 YLR120W-AYLR120W-A 102 nt-6.09□□□□□ -3.38
SPT6P23615 YBR109W-AYBR109W-A 225 nt-6.11□□□□□ -3.39
SPT6P23615 YLR222C-AYLR222C-A 231 nt-6.15□□□□□ -3.39
SPT6P23615 YEL014CYEL014C 306 nt-6.18□□□□□ -3.4
SPT6P23615 YGR035CYGR035C 351 nt-6.21□□□□□ -3.4
SPT6P23615 YLR434CYLR434C 384 nt-6.29□□□□□ -3.42
SPT6P23615 YLR412C-AYLR412C-A 207 nt-6.33□□□□□ -3.42
SPT6P23615 YOR102WYOR102W 351 nt-6.33□□□□□ -3.42
SPT6P23615 HTL1YCR020W-B 237 nt-6.34□□□□□ -3.42
SPT6P23615 tW(UCA)QtW(UCA)Q 74 nt-6.41□□□□□ -3.43
SPT6P23615 YAL066WYAL066W 309 nt-6.53□□□□□ -3.46
SPT6P23615 YBR296C-AYBR296C-A 120 nt-6.6□□□□□ -3.47
SPT6P23615 YDR406W-AYDR406W-A 246 nt-6.64□□□□□ -3.47
SPT6P23615 snR38snR38 95 nt-6.66□□□□□ -3.47
SPT6P23615 YGL188C-AYGL188C-A 141 nt-6.67□□□□□ -3.48
SPT6P23615 RPL41AYDL184C 78 nt-6.69□□□□□ -3.48
SPT6P23615 snR48snR48 113 nt-6.71□□□□□ -3.48
SPT6P23615 snR85snR85 171 nt-6.79□□□□□ -3.5
SPT6P23615 YNL097C-BYNL097C-B 123 nt-6.8□□□□□ -3.5
SPT6P23615 YBL100W-CYBL100W-C 120 nt-6.8□□□□□ -3.5
SPT6P23615 YKL118WYKL118W 312 nt-6.81□□□□□ -3.5
SPT6P23615 YBR131C-AYBR131C-A 90 nt-6.84□□□□□ -3.5
SPT6P23615 GIM4YEL003W 336 nt-6.88□□□□□ -3.51
SPT6P23615 tV(UAC)QtV(UAC)Q 76 nt-6.9□□□□□ -3.51
SPT6P23615 tL(UAA)QtL(UAA)Q 85 nt-6.95□□□□□ -3.52
SPT6P23615 YNL122CYNL122C 348 nt-6.96□□□□□ -3.52
SPT6P23615 snR56snR56 88 nt-7□□□□□ -3.53
SPT6P23615 tF(GAA)QtF(GAA)Q 75 nt-7.02□□□□□ -3.53
SPT6P23615 YCR095W-AYCR095W-A 159 nt-7.07□□□□□ -3.54
SPT6P23615 YDL114W-AYDL114W-A 114 nt-7.11□□□□□ -3.55
SPT6P23615 YJL047C-AYJL047C-A 135 nt-7.12□□□□□ -3.55
SPT6P23615 YDR183C-AYDR183C-A 258 nt-7.17□□□□□ -3.56
SPT6P23615 YNL170WYNL170W 396 nt-7.17□□□□□ -3.56
SPT6P23615 YAL063C-AYAL063C-A 291 nt-7.18□□□□□ -3.56
SPT6P23615 snR58snR58 96 nt-7.2□□□□□ -3.56
SPT6P23615 YDR157WYDR157W 402 nt-7.2□□□□□ -3.56
SPT6P23615 YPL038W-AYPL038W-A 192 nt-7.23□□□□□ -3.57
SPT6P23615 YDR118W-AYDR118W-A 117 nt-7.24□□□□□ -3.57
SPT6P23615 RPL39YJL189W 156 nt-7.24□□□□□ -3.57
SPT6P23615 YKL123WYKL123W 381 nt-7.28□□□□□ -3.57
SPT6P23615 YKL096C-BYKL096C-B 150 nt-7.36□□□□□ -3.59
SPT6P23615 YHL015W-AYHL015W-A 84 nt-7.57□□□□□ -3.62
SPT6P23615 YOL164W-AYOL164W-A 183 nt-7.69□□□□□ -3.64
SPT6P23615 YBL071C-BYBL071C-B 99 nt-7.7□□□□□ -3.64
SPT6P23615 YBL053WYBL053W 375 nt-7.73□□□□□ -3.65
SPT6P23615 snR47snR47 99 nt-7.75□□□□□ -3.65
SPT6P23615 SPG3YDR504C 384 nt-7.78□□□□□ -3.65
SPT6P23615 SOM1YEL059C-A 225 nt-7.8□□□□□ -3.66
SPT6P23615 YDL159W-AYDL159W-A 132 nt-7.81□□□□□ -3.66
SPT6P23615 snR52snR52 92 nt-7.88□□□□□ -3.67
SPT6P23615 YLR285C-AYLR285C-A 171 nt-7.89□□□□□ -3.67
SPT6P23615 YHR175W-AYHR175W-A 150 nt-7.92□□□□□ -3.68
SPT6P23615 YKL225WYKL225W 348 nt-7.98□□□□□ -3.69
SPT6P23615 YNL277W-AYNL277W-A 189 nt-8.05□□□□□ -3.7
SPT6P23615 YGR151CYGR151C 336 nt-8.07□□□□□ -3.7
SPT6P23615 YOR302WYOR302W 78 nt-8.09□□□□□ -3.7
SPT6P23615 YEL050W-AYEL050W-A 192 nt-8.25□□□□□ -3.73
SPT6P23615 YDR034C-AYDR034C-A 177 nt-8.26□□□□□ -3.73
SPT6P23615 YNR025CYNR025C 360 nt-8.27□□□□□ -3.73
SPT6P23615 tS(GCU)Q1tS(GCU)Q1 86 nt-8.32□□□□□ -3.74
SPT6P23615 tC(GCA)QtC(GCA)Q 76 nt-8.4□□□□□ -3.75
SPT6P23615 YGR122C-AYGR122C-A 129 nt-8.4□□□□□ -3.75
SPT6P23615 YAL037C-AYAL037C-A 93 nt-8.41□□□□□ -3.76
SPT6P23615 Q0143Q0143 153 nt-8.52□□□□□ -3.77
SPT6P23615 YDL240C-AYDL240C-A 138 nt-8.83□□□□□ -3.82
SPT6P23615 YPL152W-AYPL152W-A 99 nt-9.03□□□□□ -3.86
SPT6P23615 YGL007C-AYGL007C-A 87 nt-9.26□□□□□ -3.89
SPT6P23615 YOR225WYOR225W 330 nt-9.28□□□□□ -3.9
SPT6P23615 snR40snR40 97 nt-9.32□□□□□ -3.9
Retrieved 100 of 7,029 protein–RNA pairs in 76.1 ms