Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT3P12035 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT3P12035 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21■□□□□ 0.95
KRT3P12035 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
KRT3P12035 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21■□□□□ 0.95
KRT3P12035 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21■□□□□ 0.95
KRT3P12035 DUSP5P2-201ENST00000426873 1033 ntBASIC21■□□□□ 0.95
KRT3P12035 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21■□□□□ 0.95
KRT3P12035 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21■□□□□ 0.95
KRT3P12035 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21■□□□□ 0.95
KRT3P12035 KRT16P6-202ENST00000425692 1426 ntBASIC21■□□□□ 0.95
KRT3P12035 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21■□□□□ 0.95
KRT3P12035 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT3P12035 LBX2-AS1-202ENST00000603175 2083 ntBASIC21■□□□□ 0.95
KRT3P12035 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21■□□□□ 0.95
KRT3P12035 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT3P12035 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT3P12035 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KRT3P12035 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 MIR4758-201ENST00000577688 71 ntBASIC20.99■□□□□ 0.95
KRT3P12035 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT3P12035 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KRT3P12035 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT3P12035 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT3P12035 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT3P12035 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
KRT3P12035 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT3P12035 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
KRT3P12035 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT3P12035 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.98■□□□□ 0.95
KRT3P12035 AC091874.3-201ENST00000512672 1195 ntBASIC20.98■□□□□ 0.95
KRT3P12035 AL109923.1-201ENST00000618799 583 ntBASIC20.98■□□□□ 0.95
KRT3P12035 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT3P12035 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.98■□□□□ 0.95
KRT3P12035 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT3P12035 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT3P12035 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT3P12035 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
KRT3P12035 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.97■□□□□ 0.95
KRT3P12035 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.97■□□□□ 0.95
KRT3P12035 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT3P12035 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT3P12035 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT3P12035 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT3P12035 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.96■□□□□ 0.95
KRT3P12035 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT3P12035 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT3P12035 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
KRT3P12035 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.96■□□□□ 0.95
KRT3P12035 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms