Protein–RNA interactions for Protein: P0CX22

YRF1-8, Y' element ATP-dependent helicase protein 1 copy 8, yeastyeast

Predictions only

Length 1,796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-8P0CX22 tW(UCA)QtW(UCA)Q 74 nt-2.26□□□□□ -2.77
YRF1-8P0CX22 YLR120W-AYLR120W-A 102 nt-2.26□□□□□ -2.77
YRF1-8P0CX22 YDL159C-BYDL159C-B 177 nt-2.27□□□□□ -2.77
YRF1-8P0CX22 YOR309CYOR309C 381 nt-2.28□□□□□ -2.77
YRF1-8P0CX22 YMR172C-AYMR172C-A 384 nt-2.28□□□□□ -2.78
YRF1-8P0CX22 YOR376W-AYOR376W-A 156 nt-2.29□□□□□ -2.78
YRF1-8P0CX22 HTL1YCR020W-B 237 nt-2.31□□□□□ -2.78
YRF1-8P0CX22 YAL016C-BYAL016C-B 186 nt-2.31□□□□□ -2.78
YRF1-8P0CX22 YOL013W-BYOL013W-B 291 nt-2.31□□□□□ -2.78
YRF1-8P0CX22 YJR157WYJR157W 363 nt-2.31□□□□□ -2.78
YRF1-8P0CX22 YOR381W-AYOR381W-A 168 nt-2.31□□□□□ -2.78
YRF1-8P0CX22 YBR178WYBR178W 375 nt-2.33□□□□□ -2.78
YRF1-8P0CX22 BIL1YOR304C-A 231 nt-2.36□□□□□ -2.79
YRF1-8P0CX22 YEL014CYEL014C 306 nt-2.36□□□□□ -2.79
YRF1-8P0CX22 YOR329W-AYOR329W-A 210 nt-2.36□□□□□ -2.79
YRF1-8P0CX22 YGL041CYGL041C 204 nt-2.39□□□□□ -2.79
YRF1-8P0CX22 YOR316C-AYOR316C-A 210 nt-2.41□□□□□ -2.8
YRF1-8P0CX22 YHR180C-BYHR180C-B 105 nt-2.44□□□□□ -2.8
YRF1-8P0CX22 YLR299C-AYLR299C-A 93 nt-2.46□□□□□ -2.8
YRF1-8P0CX22 YPR197CYPR197C 564 nt-2.46□□□□□ -2.8
YRF1-8P0CX22 snR78snR78 87 nt-2.48□□□□□ -2.81
YRF1-8P0CX22 YAL063C-AYAL063C-A 291 nt-2.56□□□□□ -2.82
YRF1-8P0CX22 YDR524W-CYDR524W-C 90 nt-2.58□□□□□ -2.82
YRF1-8P0CX22 YOL083C-AYOL083C-A 141 nt-2.58□□□□□ -2.82
YRF1-8P0CX22 YER181CYER181C 324 nt-2.59□□□□□ -2.82
YRF1-8P0CX22 YGR035CYGR035C 351 nt-2.59□□□□□ -2.82
YRF1-8P0CX22 YDR183C-AYDR183C-A 258 nt-2.61□□□□□ -2.83
YRF1-8P0CX22 YNR025CYNR025C 360 nt-2.62□□□□□ -2.83
YRF1-8P0CX22 YDR413CYDR413C 576 nt-2.63□□□□□ -2.83
YRF1-8P0CX22 snR55snR55 98 nt-2.66□□□□□ -2.83
YRF1-8P0CX22 YLR222C-AYLR222C-A 231 nt-2.67□□□□□ -2.84
YRF1-8P0CX22 YOR102WYOR102W 351 nt-2.68□□□□□ -2.84
YRF1-8P0CX22 YBR131C-AYBR131C-A 90 nt-2.69□□□□□ -2.84
YRF1-8P0CX22 YKL118WYKL118W 312 nt-2.69□□□□□ -2.84
YRF1-8P0CX22 tF(GAA)QtF(GAA)Q 75 nt-2.72□□□□□ -2.84
YRF1-8P0CX22 YPR012WYPR012W 255 nt-2.73□□□□□ -2.85
YRF1-8P0CX22 ATP19YOL077W-A 207 nt-2.74□□□□□ -2.85
YRF1-8P0CX22 YKL106C-AYKL106C-A 120 nt-2.76□□□□□ -2.85
YRF1-8P0CX22 YPL038W-AYPL038W-A 192 nt-2.77□□□□□ -2.85
YRF1-8P0CX22 snR48snR48 113 nt-2.8□□□□□ -2.86
YRF1-8P0CX22 YJL150WYJL150W 303 nt-2.82□□□□□ -2.86
YRF1-8P0CX22 snR80snR80 171 nt-2.83□□□□□ -2.86
YRF1-8P0CX22 YNL097C-BYNL097C-B 123 nt-2.84□□□□□ -2.86
YRF1-8P0CX22 tL(UAA)QtL(UAA)Q 85 nt-2.87□□□□□ -2.87
YRF1-8P0CX22 tR(UCU)Q1tR(UCU)Q1 73 nt-2.87□□□□□ -2.87
YRF1-8P0CX22 snR6snR6 112 nt-2.89□□□□□ -2.87
YRF1-8P0CX22 YGL188C-AYGL188C-A 141 nt-2.89□□□□□ -2.87
YRF1-8P0CX22 YOL155W-AYOL155W-A 135 nt-2.9□□□□□ -2.87
YRF1-8P0CX22 RPL41AYDL184C 78 nt-2.91□□□□□ -2.88
YRF1-8P0CX22 YNL198CYNL198C 303 nt-2.96□□□□□ -2.88
YRF1-8P0CX22 YBR109W-AYBR109W-A 225 nt-2.97□□□□□ -2.88
YRF1-8P0CX22 YBR296C-AYBR296C-A 120 nt-2.98□□□□□ -2.89
YRF1-8P0CX22 YOR335W-AYOR335W-A 81 nt-3□□□□□ -2.89
YRF1-8P0CX22 GIM4YEL003W 336 nt-3.01□□□□□ -2.89
YRF1-8P0CX22 RPL39YJL189W 156 nt-3.02□□□□□ -2.89
YRF1-8P0CX22 snR73snR73 106 nt-3.03□□□□□ -2.89
YRF1-8P0CX22 YJR162CYJR162C 351 nt-3.04□□□□□ -2.9
YRF1-8P0CX22 YNL337WYNL337W 255 nt-3.04□□□□□ -2.9
YRF1-8P0CX22 snR38snR38 95 nt-3.04□□□□□ -2.9
YRF1-8P0CX22 snR56snR56 88 nt-3.07□□□□□ -2.9
YRF1-8P0CX22 YOR302WYOR302W 78 nt-3.09□□□□□ -2.9
YRF1-8P0CX22 RPL41BYDL133C-A 78 nt-3.1□□□□□ -2.91
YRF1-8P0CX22 YDR524C-AYDR524C-A 120 nt-3.1□□□□□ -2.91
YRF1-8P0CX22 YNL277W-AYNL277W-A 189 nt-3.1□□□□□ -2.91
YRF1-8P0CX22 YHL015W-AYHL015W-A 84 nt-3.12□□□□□ -2.91
YRF1-8P0CX22 YEL050W-AYEL050W-A 192 nt-3.14□□□□□ -2.91
YRF1-8P0CX22 YDR406W-AYDR406W-A 246 nt-3.2□□□□□ -2.92
YRF1-8P0CX22 YDL240C-AYDL240C-A 138 nt-3.22□□□□□ -2.92
YRF1-8P0CX22 snR52snR52 92 nt-3.23□□□□□ -2.93
YRF1-8P0CX22 SOM1YEL059C-A 225 nt-3.27□□□□□ -2.93
YRF1-8P0CX22 YDR157WYDR157W 402 nt-3.29□□□□□ -2.94
YRF1-8P0CX22 YCR095W-AYCR095W-A 159 nt-3.34□□□□□ -2.94
YRF1-8P0CX22 YBL071C-BYBL071C-B 99 nt-3.38□□□□□ -2.95
YRF1-8P0CX22 tV(UAC)QtV(UAC)Q 76 nt-3.38□□□□□ -2.95
YRF1-8P0CX22 YDL114W-AYDL114W-A 114 nt-3.43□□□□□ -2.96
YRF1-8P0CX22 YGR151CYGR151C 336 nt-3.43□□□□□ -2.96
YRF1-8P0CX22 snR47snR47 99 nt-3.45□□□□□ -2.96
YRF1-8P0CX22 YOL164W-AYOL164W-A 183 nt-3.47□□□□□ -2.96
YRF1-8P0CX22 snR85snR85 171 nt-3.48□□□□□ -2.97
YRF1-8P0CX22 YPL152W-AYPL152W-A 99 nt-3.52□□□□□ -2.97
YRF1-8P0CX22 snR87snR87 109 nt-3.61□□□□□ -2.99
YRF1-8P0CX22 YBL053WYBL053W 375 nt-3.61□□□□□ -2.99
YRF1-8P0CX22 YDR118W-AYDR118W-A 117 nt-3.62□□□□□ -2.99
YRF1-8P0CX22 snR65snR65 100 nt-3.63□□□□□ -2.99
YRF1-8P0CX22 YAL037C-AYAL037C-A 93 nt-3.66□□□□□ -3
YRF1-8P0CX22 YKL225WYKL225W 348 nt-3.72□□□□□ -3.01
YRF1-8P0CX22 YBL100W-CYBL100W-C 120 nt-3.74□□□□□ -3.01
YRF1-8P0CX22 Q0017Q0017 162 nt-3.78□□□□□ -3.01
YRF1-8P0CX22 tS(GCU)Q1tS(GCU)Q1 86 nt-3.79□□□□□ -3.02
YRF1-8P0CX22 snR58snR58 96 nt-3.81□□□□□ -3.02
YRF1-8P0CX22 YHR175W-AYHR175W-A 150 nt-3.84□□□□□ -3.02
YRF1-8P0CX22 SPG3YDR504C 384 nt-3.85□□□□□ -3.03
YRF1-8P0CX22 YGR122C-AYGR122C-A 129 nt-3.94□□□□□ -3.04
YRF1-8P0CX22 YKL096C-BYKL096C-B 150 nt-3.98□□□□□ -3.05
YRF1-8P0CX22 VAR1Q0140 1197 nt-3.99□□□□□ -3.05
YRF1-8P0CX22 YDL159W-AYDL159W-A 132 nt-4.07□□□□□ -3.06
YRF1-8P0CX22 YDR034C-AYDR034C-A 177 nt-4.15□□□□□ -3.07
YRF1-8P0CX22 YOR231C-AYOR231C-A 201 nt-4.15□□□□□ -3.07
YRF1-8P0CX22 YCL001W-BYCL001W-B 255 nt-4.22□□□□□ -3.08
YRF1-8P0CX22 YGL007C-AYGL007C-A 87 nt-4.3□□□□□ -3.1
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms