Protein–RNA interactions for Protein: P04786

TOP1, DNA topoisomerase 1, yeastyeast

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOP1P04786 YNL198CYNL198C 303 nt0.36□□□□□ -2.35
TOP1P04786 snR39BsnR39B 96 nt0.36□□□□□ -2.35
TOP1P04786 YOR329W-AYOR329W-A 210 nt0.35□□□□□ -2.35
TOP1P04786 YLR466C-BYLR466C-B 117 nt0.34□□□□□ -2.36
TOP1P04786 YBL053WYBL053W 375 nt0.33□□□□□ -2.36
TOP1P04786 YNL054W-BYNL054W-B 5250 nt0.33□□□□□ -2.36
TOP1P04786 YDR210WYDR210W 228 nt0.32□□□□□ -2.36
TOP1P04786 YNL337WYNL337W 255 nt0.32□□□□□ -2.36
TOP1P04786 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
TOP1P04786 YOR102WYOR102W 351 nt0.29□□□□□ -2.36
TOP1P04786 YDL007C-AYDL007C-A 258 nt0.28□□□□□ -2.36
TOP1P04786 tM(CAU)Q2tM(CAU)Q2 78 nt0.28□□□□□ -2.36
TOP1P04786 YGR151CYGR151C 336 nt0.28□□□□□ -2.36
TOP1P04786 SOV1YMR066W 2697 nt0.27□□□□□ -2.37
TOP1P04786 YHL015W-AYHL015W-A 84 nt0.27□□□□□ -2.37
TOP1P04786 YBR099CYBR099C 384 nt0.26□□□□□ -2.37
TOP1P04786 YGL007C-AYGL007C-A 87 nt0.25□□□□□ -2.37
TOP1P04786 CSE1YGL238W 2883 nt0.25□□□□□ -2.37
TOP1P04786 Q0032Q0032 291 nt0.23□□□□□ -2.37
TOP1P04786 YGR146C-AYGR146C-A 162 nt0.23□□□□□ -2.37
TOP1P04786 YOR186C-AYOR186C-A 210 nt0.23□□□□□ -2.37
TOP1P04786 snR45snR45 172 nt0.22□□□□□ -2.37
TOP1P04786 YNL338WYNL338W 159 nt0.19□□□□□ -2.38
TOP1P04786 YOR225WYOR225W 330 nt0.19□□□□□ -2.38
TOP1P04786 YNL067W-BYNL067W-B 141 nt0.18□□□□□ -2.38
TOP1P04786 EST1YLR233C 2100 nt0.16□□□□□ -2.38
TOP1P04786 snR69snR69 101 nt0.12□□□□□ -2.39
TOP1P04786 PMP2YEL017C-A 132 nt0.1□□□□□ -2.39
TOP1P04786 YJL077W-AYJL077W-A 87 nt0.08□□□□□ -2.4
TOP1P04786 YNL205CYNL205C 423 nt0.08□□□□□ -2.4
TOP1P04786 YGR164WYGR164W 336 nt0.05□□□□□ -2.4
TOP1P04786 YIL071W-AYIL071W-A 477 nt0.04□□□□□ -2.4
TOP1P04786 YLR294CYLR294C 330 nt0.03□□□□□ -2.4
TOP1P04786 SEC10YLR166C 2616 nt0.02□□□□□ -2.41
TOP1P04786 RDS3YPR094W 324 nt-0.01□□□□□ -2.41
TOP1P04786 tD(GUC)QtD(GUC)Q 75 nt-0.02□□□□□ -2.41
TOP1P04786 TFB5YDR079C-A 219 nt-0.03□□□□□ -2.41
TOP1P04786 SOM1YEL059C-A 225 nt-0.03□□□□□ -2.41
TOP1P04786 snR128snR128 126 nt-0.03□□□□□ -2.41
TOP1P04786 YNL266WYNL266W 420 nt-0.04□□□□□ -2.42
TOP1P04786 YCR095W-AYCR095W-A 159 nt-0.05□□□□□ -2.42
TOP1P04786 tQ(UUG)QtQ(UUG)Q 76 nt-0.05□□□□□ -2.42
TOP1P04786 YER090C-AYER090C-A 90 nt-0.07□□□□□ -2.42
TOP1P04786 YBR178WYBR178W 375 nt-0.07□□□□□ -2.42
TOP1P04786 YML100W-AYML100W-A 174 nt-0.08□□□□□ -2.42
TOP1P04786 YCL001W-BYCL001W-B 255 nt-0.08□□□□□ -2.42
TOP1P04786 snR50snR50 90 nt-0.11□□□□□ -2.43
TOP1P04786 YLR286W-AYLR286W-A 135 nt-0.12□□□□□ -2.43
TOP1P04786 YBR196C-AYBR196C-A 150 nt-0.14□□□□□ -2.43
TOP1P04786 YDL159C-BYDL159C-B 177 nt-0.15□□□□□ -2.43
TOP1P04786 YLR299C-AYLR299C-A 93 nt-0.24□□□□□ -2.45
TOP1P04786 YNL170WYNL170W 396 nt-0.27□□□□□ -2.45
TOP1P04786 YJL113WYJL113W 4647 nt-0.29□□□□□ -2.46
TOP1P04786 snR67snR67 82 nt-0.3□□□□□ -2.46
TOP1P04786 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
TOP1P04786 ATP8Q0080 147 nt-0.31□□□□□ -2.46
TOP1P04786 tA(UGC)QtA(UGC)Q 76 nt-0.33□□□□□ -2.46
TOP1P04786 SKI7YOR076C 2244 nt-0.36□□□□□ -2.47
TOP1P04786 YML054C-AYML054C-A 159 nt-0.37□□□□□ -2.47
TOP1P04786 YBL071C-BYBL071C-B 99 nt-0.38□□□□□ -2.47
TOP1P04786 PAU9YBL108C-A 129 nt-0.39□□□□□ -2.47
TOP1P04786 YAL037C-AYAL037C-A 93 nt-0.42□□□□□ -2.48
TOP1P04786 YOL083C-AYOL083C-A 141 nt-0.42□□□□□ -2.48
TOP1P04786 snR81snR81 201 nt-0.43□□□□□ -2.48
TOP1P04786 Q0092Q0092 141 nt-0.46□□□□□ -2.48
TOP1P04786 YHR180C-BYHR180C-B 105 nt-0.48□□□□□ -2.49
TOP1P04786 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
TOP1P04786 YNL103W-AYNL103W-A 90 nt-0.49□□□□□ -2.49
TOP1P04786 YOL164W-AYOL164W-A 183 nt-0.51□□□□□ -2.49
TOP1P04786 snR61snR61 90 nt-0.54□□□□□ -2.5
TOP1P04786 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
TOP1P04786 YBR109W-AYBR109W-A 225 nt-0.56□□□□□ -2.5
TOP1P04786 YGL041C-BYGL041C-B 183 nt-0.58□□□□□ -2.5
TOP1P04786 snR38snR38 95 nt-0.62□□□□□ -2.51
TOP1P04786 YBR296C-AYBR296C-A 120 nt-0.64□□□□□ -2.51
TOP1P04786 YGR240C-AYGR240C-A 201 nt-0.65□□□□□ -2.51
TOP1P04786 snR47snR47 99 nt-0.65□□□□□ -2.51
TOP1P04786 RPL41AYDL184C 78 nt-0.66□□□□□ -2.52
TOP1P04786 Q0143Q0143 153 nt-0.66□□□□□ -2.52
TOP1P04786 YBL100W-CYBL100W-C 120 nt-0.7□□□□□ -2.52
TOP1P04786 snR161snR161 161 nt-0.7□□□□□ -2.52
TOP1P04786 YOR376W-AYOR376W-A 156 nt-0.72□□□□□ -2.52
TOP1P04786 YNR077CYNR077C 255 nt-0.73□□□□□ -2.53
TOP1P04786 tS(GCU)Q1tS(GCU)Q1 86 nt-0.77□□□□□ -2.53
TOP1P04786 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
TOP1P04786 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
TOP1P04786 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
TOP1P04786 snR33snR33 183 nt-0.79□□□□□ -2.54
TOP1P04786 YKL106C-AYKL106C-A 120 nt-0.81□□□□□ -2.54
TOP1P04786 snR62snR62 100 nt-0.82□□□□□ -2.54
TOP1P04786 YKL225WYKL225W 348 nt-0.87□□□□□ -2.55
TOP1P04786 YDR034C-AYDR034C-A 177 nt-0.88□□□□□ -2.55
TOP1P04786 YOR316C-AYOR316C-A 210 nt-0.88□□□□□ -2.55
TOP1P04786 snR85snR85 171 nt-0.91□□□□□ -2.56
TOP1P04786 YHR217CYHR217C 462 nt-0.93□□□□□ -2.56
TOP1P04786 YMR326CYMR326C 309 nt-0.93□□□□□ -2.56
TOP1P04786 snR77snR77 88 nt-0.96□□□□□ -2.56
TOP1P04786 YBL109WYBL109W 336 nt-1□□□□□ -2.57
TOP1P04786 CDC65tQ(CUG)M 72 nt-1.01□□□□□ -2.57
TOP1P04786 tP(UGG)QtP(UGG)Q 72 nt-1.03□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 68.7 ms