Protein–RNA interactions for Protein: P04050

RPO21, DNA-directed RNA polymerase II subunit RPB1, yeast

Known RBP Predictions only

Length 1,733 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	P04050	YJL150W	YJL150W	303 nt		-2.52	□□□□□ -2.81
RPO21	P04050	YBR178W	YBR178W	375 nt		-2.52	□□□□□ -2.81
RPO21	P04050	YJR157W	YJR157W	363 nt		-2.53	□□□□□ -2.81
RPO21	P04050	YPR012W	YPR012W	255 nt		-2.53	□□□□□ -2.81
RPO21	P04050	snR41	snR41	95 nt		-2.53	□□□□□ -2.81
RPO21	P04050	YLR406C-A	YLR406C-A	150 nt		-2.54	□□□□□ -2.82
RPO21	P04050	tM(CAU)Q2	tM(CAU)Q2	78 nt		-2.54	□□□□□ -2.82
RPO21	P04050	YFL032W	YFL032W	321 nt		-2.56	□□□□□ -2.82
RPO21	P04050	YOR335W-A	YOR335W-A	81 nt		-2.59	□□□□□ -2.82
RPO21	P04050	YKL106C-A	YKL106C-A	120 nt		-2.61	□□□□□ -2.83
RPO21	P04050	RPL41B	YDL133C-A	78 nt		-2.62	□□□□□ -2.83
RPO21	P04050	YLR299C-A	YLR299C-A	93 nt		-2.62	□□□□□ -2.83
RPO21	P04050	MPC1	YGL080W	393 nt		-2.64	□□□□□ -2.83
RPO21	P04050	ATP6	Q0085	780 nt		-2.68	□□□□□ -2.84
RPO21	P04050	YAL016C-B	YAL016C-B	186 nt		-2.69	□□□□□ -2.84
RPO21	P04050	BIL1	YOR304C-A	231 nt		-2.69	□□□□□ -2.84
RPO21	P04050	YDR413C	YDR413C	576 nt		-2.72	□□□□□ -2.84
RPO21	P04050	YOR381W-A	YOR381W-A	168 nt		-2.72	□□□□□ -2.84
RPO21	P04050	CSN9	YDR179C	489 nt		-2.73	□□□□□ -2.85
RPO21	P04050	snR78	snR78	87 nt		-2.75	□□□□□ -2.85
RPO21	P04050	snR87	snR87	109 nt		-2.75	□□□□□ -2.85
RPO21	P04050	Q0255	Q0255	1419 nt		-2.76	□□□□□ -2.85
RPO21	P04050	YOR329W-A	YOR329W-A	210 nt		-2.81	□□□□□ -2.86
RPO21	P04050	snR60	snR60	104 nt		-2.87	□□□□□ -2.87
RPO21	P04050	YNL324W	YNL324W	396 nt		-2.88	□□□□□ -2.87
RPO21	P04050	YNL028W	YNL028W	318 nt		-2.89	□□□□□ -2.87
RPO21	P04050	YBR109W-A	YBR109W-A	225 nt		-2.89	□□□□□ -2.87
RPO21	P04050	YGL041C	YGL041C	204 nt		-2.9	□□□□□ -2.87
RPO21	P04050	YGR035C	YGR035C	351 nt		-2.91	□□□□□ -2.88
RPO21	P04050	YEL014C	YEL014C	306 nt		-2.93	□□□□□ -2.88
RPO21	P04050	YLR222C-A	YLR222C-A	231 nt		-2.94	□□□□□ -2.88
RPO21	P04050	snR54	snR54	86 nt		-2.94	□□□□□ -2.88
RPO21	P04050	YJL136W-A	YJL136W-A	84 nt		-2.97	□□□□□ -2.89
RPO21	P04050	YLR434C	YLR434C	384 nt		-2.99	□□□□□ -2.89
RPO21	P04050	YOR102W	YOR102W	351 nt		-2.99	□□□□□ -2.89
RPO21	P04050	YDR406W-A	YDR406W-A	246 nt		-3	□□□□□ -2.89
RPO21	P04050	RPL41A	YDL184C	78 nt		-3.02	□□□□□ -2.89
RPO21	P04050	YLR120W-A	YLR120W-A	102 nt		-3.02	□□□□□ -2.89
RPO21	P04050	YMR001C-A	YMR001C-A	231 nt		-3.02	□□□□□ -2.89
RPO21	P04050	YBR296C-A	YBR296C-A	120 nt		-3.04	□□□□□ -2.9
RPO21	P04050	YER006C-A	YER006C-A	318 nt		-3.07	□□□□□ -2.9
RPO21	P04050	snR85	snR85	171 nt		-3.1	□□□□□ -2.91
RPO21	P04050	YNL097C-B	YNL097C-B	123 nt		-3.11	□□□□□ -2.91
RPO21	P04050	snR38	snR38	95 nt		-3.11	□□□□□ -2.91
RPO21	P04050	YLR412C-A	YLR412C-A	207 nt		-3.12	□□□□□ -2.91
RPO21	P04050	YGL188C-A	YGL188C-A	141 nt		-3.18	□□□□□ -2.92
RPO21	P04050	YKL118W	YKL118W	312 nt		-3.19	□□□□□ -2.92
RPO21	P04050	HTL1	YCR020W-B	237 nt		-3.19	□□□□□ -2.92
RPO21	P04050	tV(UAC)Q	tV(UAC)Q	76 nt		-3.19	□□□□□ -2.92
RPO21	P04050	GIM4	YEL003W	336 nt		-3.2	□□□□□ -2.92
RPO21	P04050	snR58	snR58	96 nt		-3.21	□□□□□ -2.92
RPO21	P04050	snR56	snR56	88 nt		-3.22	□□□□□ -2.93
RPO21	P04050	snR48	snR48	113 nt		-3.22	□□□□□ -2.93
RPO21	P04050	YCR095W-A	YCR095W-A	159 nt		-3.23	□□□□□ -2.93
RPO21	P04050	YDR157W	YDR157W	402 nt		-3.24	□□□□□ -2.93
RPO21	P04050	tW(UCA)Q	tW(UCA)Q	74 nt		-3.24	□□□□□ -2.93
RPO21	P04050	YAL066W	YAL066W	309 nt		-3.24	□□□□□ -2.93
RPO21	P04050	YBL100W-C	YBL100W-C	120 nt		-3.24	□□□□□ -2.93
RPO21	P04050	YDL114W-A	YDL114W-A	114 nt		-3.26	□□□□□ -2.93
RPO21	P04050	YBR131C-A	YBR131C-A	90 nt		-3.3	□□□□□ -2.94
RPO21	P04050	YDR118W-A	YDR118W-A	117 nt		-3.31	□□□□□ -2.94
RPO21	P04050	tL(UAA)Q	tL(UAA)Q	85 nt		-3.31	□□□□□ -2.94
RPO21	P04050	RPL39	YJL189W	156 nt		-3.33	□□□□□ -2.94
RPO21	P04050	YNL122C	YNL122C	348 nt		-3.37	□□□□□ -2.95
RPO21	P04050	tF(GAA)Q	tF(GAA)Q	75 nt		-3.42	□□□□□ -2.96
RPO21	P04050	YNL170W	YNL170W	396 nt		-3.42	□□□□□ -2.96
RPO21	P04050	YKL096C-B	YKL096C-B	150 nt		-3.44	□□□□□ -2.96
RPO21	P04050	YJL047C-A	YJL047C-A	135 nt		-3.45	□□□□□ -2.96
RPO21	P04050	YAL063C-A	YAL063C-A	291 nt		-3.46	□□□□□ -2.96
RPO21	P04050	YPL038W-A	YPL038W-A	192 nt		-3.51	□□□□□ -2.97
RPO21	P04050	YDL159W-A	YDL159W-A	132 nt		-3.52	□□□□□ -2.97
RPO21	P04050	YBL053W	YBL053W	375 nt		-3.54	□□□□□ -2.98
RPO21	P04050	YOL164W-A	YOL164W-A	183 nt		-3.56	□□□□□ -2.98
RPO21	P04050	snR47	snR47	99 nt		-3.56	□□□□□ -2.98
RPO21	P04050	YDR183C-A	YDR183C-A	258 nt		-3.57	□□□□□ -2.98
RPO21	P04050	YBL071C-B	YBL071C-B	99 nt		-3.58	□□□□□ -2.98
RPO21	P04050	YHL015W-A	YHL015W-A	84 nt		-3.61	□□□□□ -2.99
RPO21	P04050	SOM1	YEL059C-A	225 nt		-3.63	□□□□□ -2.99
RPO21	P04050	YHR175W-A	YHR175W-A	150 nt		-3.64	□□□□□ -2.99
RPO21	P04050	YKL123W	YKL123W	381 nt		-3.65	□□□□□ -2.99
RPO21	P04050	SPG3	YDR504C	384 nt		-3.67	□□□□□ -3
RPO21	P04050	YKL225W	YKL225W	348 nt		-3.7	□□□□□ -3
RPO21	P04050	YGR151C	YGR151C	336 nt		-3.71	□□□□□ -3
RPO21	P04050	YEL050W-A	YEL050W-A	192 nt		-3.72	□□□□□ -3
RPO21	P04050	snR52	snR52	92 nt		-3.76	□□□□□ -3.01
RPO21	P04050	tC(GCA)Q	tC(GCA)Q	76 nt		-3.84	□□□□□ -3.02
RPO21	P04050	YOR302W	YOR302W	78 nt		-3.86	□□□□□ -3.03
RPO21	P04050	YDR034C-A	YDR034C-A	177 nt		-3.87	□□□□□ -3.03
RPO21	P04050	YGR122C-A	YGR122C-A	129 nt		-3.87	□□□□□ -3.03
RPO21	P04050	tS(GCU)Q1	tS(GCU)Q1	86 nt		-3.87	□□□□□ -3.03
RPO21	P04050	YAL037C-A	YAL037C-A	93 nt		-3.87	□□□□□ -3.03
RPO21	P04050	YNL277W-A	YNL277W-A	189 nt		-3.96	□□□□□ -3.04
RPO21	P04050	YLR285C-A	YLR285C-A	171 nt		-4	□□□□□ -3.05
RPO21	P04050	Q0143	Q0143	153 nt		-4.16	□□□□□ -3.08
RPO21	P04050	YOR225W	YOR225W	330 nt		-4.23	□□□□□ -3.09
RPO21	P04050	snR40	snR40	97 nt		-4.24	□□□□□ -3.09
RPO21	P04050	YGL007C-A	YGL007C-A	87 nt		-4.29	□□□□□ -3.1
RPO21	P04050	YNR025C	YNR025C	360 nt		-4.34	□□□□□ -3.1
RPO21	P04050	YDL240C-A	YDL240C-A	138 nt		-4.36	□□□□□ -3.11
RPO21	P04050	YLR294C	YLR294C	330 nt		-4.39	□□□□□ -3.11

Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms