Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
OPN1SWP03999 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPN1SWP03999 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
OPN1SWP03999 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
OPN1SWP03999 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
OPN1SWP03999 AC120498.9-201ENST00000339021 3867 ntBASIC18.59■□□□□ 0.57
OPN1SWP03999 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.59■□□□□ 0.57
OPN1SWP03999 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.59■□□□□ 0.57
OPN1SWP03999 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 AC093484.2-201ENST00000580996 2166 ntBASIC18.59■□□□□ 0.57
OPN1SWP03999 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
OPN1SWP03999 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPN1SWP03999 AC018445.3-201ENST00000624177 1945 ntBASIC18.59■□□□□ 0.57
OPN1SWP03999 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
OPN1SWP03999 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
OPN1SWP03999 AL020996.1-203ENST00000536896 2307 ntBASIC18.58■□□□□ 0.57
OPN1SWP03999 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
OPN1SWP03999 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.57
OPN1SWP03999 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
OPN1SWP03999 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
OPN1SWP03999 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.58■□□□□ 0.57
OPN1SWP03999 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
OPN1SWP03999 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.58■□□□□ 0.57
OPN1SWP03999 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
OPN1SWP03999 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
OPN1SWP03999 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.58■□□□□ 0.56
OPN1SWP03999 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.58■□□□□ 0.56
OPN1SWP03999 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
OPN1SWP03999 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
OPN1SWP03999 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
OPN1SWP03999 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
OPN1SWP03999 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
OPN1SWP03999 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
OPN1SWP03999 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.57■□□□□ 0.56
OPN1SWP03999 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
OPN1SWP03999 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
OPN1SWP03999 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
OPN1SWP03999 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.57■□□□□ 0.56
OPN1SWP03999 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.56■□□□□ 0.56
OPN1SWP03999 AC005332.7-201ENST00000614046 2005 ntBASIC18.56■□□□□ 0.56
OPN1SWP03999 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.56■□□□□ 0.56
OPN1SWP03999 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.56■□□□□ 0.56
OPN1SWP03999 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.56■□□□□ 0.56
OPN1SWP03999 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.56■□□□□ 0.56
OPN1SWP03999 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.56■□□□□ 0.56
OPN1SWP03999 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.56■□□□□ 0.56
OPN1SWP03999 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
OPN1SWP03999 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
OPN1SWP03999 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
OPN1SWP03999 AP000974.1-201ENST00000623909 2387 ntBASIC18.56■□□□□ 0.56
OPN1SWP03999 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms