Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN1O95832 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN1O95832 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN1O95832 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN1O95832 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN1O95832 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN1O95832 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN1O95832 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN1O95832 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN1O95832 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN1O95832 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLDN1O95832 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN1O95832 AC116050.2-201ENST00000612102 1779 ntBASIC17.8■□□□□ 0.44
CLDN1O95832 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN1O95832 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 AL024507.2-201ENST00000606070 2574 ntBASIC17.8■□□□□ 0.44
CLDN1O95832 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN1O95832 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN1O95832 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.79■□□□□ 0.44
CLDN1O95832 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN1O95832 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN1O95832 AC010203.1-204ENST00000548782 407 ntBASIC17.79■□□□□ 0.44
CLDN1O95832 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN1O95832 FITM1-202ENST00000559294 800 ntBASIC17.79■□□□□ 0.44
CLDN1O95832 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN1O95832 AC006011.2-201ENST00000621313 1158 ntBASIC17.79■□□□□ 0.44
CLDN1O95832 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN1O95832 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN1O95832 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN1O95832 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN1O95832 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN1O95832 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 NBPF21P-201ENST00000425093 1451 ntBASIC17.78■□□□□ 0.44
CLDN1O95832 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN1O95832 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN1O95832 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN1O95832 KRT126P-201ENST00000549467 1181 ntBASIC17.78■□□□□ 0.44
CLDN1O95832 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN1O95832 AL358472.4-201ENST00000633140 710 ntBASIC17.78■□□□□ 0.44
CLDN1O95832 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN1O95832 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN1O95832 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN1O95832 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN1O95832 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN1O95832 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN1O95832 AL121829.2-201ENST00000620908 328 ntBASIC17.77■□□□□ 0.44
CLDN1O95832 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN1O95832 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms