Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
CCNT1O60563 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CCNT1O60563 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.68■■□□□ 1.22
CCNT1O60563 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.68■■□□□ 1.22
CCNT1O60563 CD99P1-205ENST00000527459 561 ntBASIC22.68■■□□□ 1.22
CCNT1O60563 UNC93B5-201ENST00000530315 699 ntBASIC22.68■■□□□ 1.22
CCNT1O60563 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.68■■□□□ 1.22
CCNT1O60563 SOX15-203ENST00000570788 1093 ntBASIC22.68■■□□□ 1.22
CCNT1O60563 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 AL691432.2-201ENST00000607222 2038 ntBASIC22.68■■□□□ 1.22
CCNT1O60563 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.68■■□□□ 1.22
CCNT1O60563 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.68■■□□□ 1.22
CCNT1O60563 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCNT1O60563 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.68■■□□□ 1.22
CCNT1O60563 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.67■■□□□ 1.22
CCNT1O60563 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.67■■□□□ 1.22
CCNT1O60563 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.67■■□□□ 1.22
CCNT1O60563 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CCNT1O60563 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.67■■□□□ 1.22
CCNT1O60563 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.67■■□□□ 1.22
CCNT1O60563 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.67■■□□□ 1.22
CCNT1O60563 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCNT1O60563 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
CCNT1O60563 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCNT1O60563 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.66■■□□□ 1.22
CCNT1O60563 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNT1O60563 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CCNT1O60563 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 TCF3P1-201ENST00000423021 1937 ntBASIC22.65■■□□□ 1.22
CCNT1O60563 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNT1O60563 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
CCNT1O60563 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCNT1O60563 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNT1O60563 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CCNT1O60563 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.65■■□□□ 1.22
CCNT1O60563 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
CCNT1O60563 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNT1O60563 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.64■■□□□ 1.22
CCNT1O60563 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNT1O60563 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CCNT1O60563 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNT1O60563 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 UNC93B4-201ENST00000505679 747 ntBASIC22.64■■□□□ 1.21
CCNT1O60563 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.64■■□□□ 1.21
CCNT1O60563 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.64■■□□□ 1.21
CCNT1O60563 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.64■■□□□ 1.21
CCNT1O60563 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.64■■□□□ 1.21
CCNT1O60563 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNT1O60563 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNT1O60563 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CCNT1O60563 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
CCNT1O60563 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNT1O60563 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCNT1O60563 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
CCNT1O60563 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNT1O60563 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNT1O60563 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNT1O60563 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNT1O60563 AC124283.5-201ENST00000624661 1809 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms