Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 snR128snR128 126 nt-0.09□□□□□ -2.42
YRF1-4O13559 YGR164WYGR164W 336 nt-0.1□□□□□ -2.43
YRF1-4O13559 YDR210WYDR210W 228 nt-0.11□□□□□ -2.43
YRF1-4O13559 YLR342W-AYLR342W-A 174 nt-0.11□□□□□ -2.43
YRF1-4O13559 URB1YKL014C 5295 nt-0.12□□□□□ -2.43
YRF1-4O13559 tM(CAU)Q2tM(CAU)Q2 78 nt-0.13□□□□□ -2.43
YRF1-4O13559 snR52snR52 92 nt-0.16□□□□□ -2.43
YRF1-4O13559 YJL077W-AYJL077W-A 87 nt-0.17□□□□□ -2.44
YRF1-4O13559 YGR146C-AYGR146C-A 162 nt-0.18□□□□□ -2.44
YRF1-4O13559 snR48snR48 113 nt-0.19□□□□□ -2.44
YRF1-4O13559 snR39BsnR39B 96 nt-0.2□□□□□ -2.44
YRF1-4O13559 YOR329W-AYOR329W-A 210 nt-0.22□□□□□ -2.45
YRF1-4O13559 YDR406W-AYDR406W-A 246 nt-0.24□□□□□ -2.45
YRF1-4O13559 YMR046W-AYMR046W-A 129 nt-0.25□□□□□ -2.45
YRF1-4O13559 SBH2YER019C-A 267 nt-0.32□□□□□ -2.46
YRF1-4O13559 snR69snR69 101 nt-0.32□□□□□ -2.46
YRF1-4O13559 SPG3YDR504C 384 nt-0.33□□□□□ -2.46
YRF1-4O13559 YDL007C-AYDL007C-A 258 nt-0.34□□□□□ -2.46
YRF1-4O13559 PMP2YEL017C-A 132 nt-0.34□□□□□ -2.46
YRF1-4O13559 tQ(UUG)QtQ(UUG)Q 76 nt-0.35□□□□□ -2.47
YRF1-4O13559 YOR102WYOR102W 351 nt-0.36□□□□□ -2.47
YRF1-4O13559 SEC10YLR166C 2616 nt-0.37□□□□□ -2.47
YRF1-4O13559 YML100W-AYML100W-A 174 nt-0.38□□□□□ -2.47
YRF1-4O13559 tL(UAA)QtL(UAA)Q 85 nt-0.39□□□□□ -2.47
YRF1-4O13559 YHL015W-AYHL015W-A 84 nt-0.39□□□□□ -2.47
YRF1-4O13559 YNL067W-BYNL067W-B 141 nt-0.4□□□□□ -2.47
YRF1-4O13559 YNL205CYNL205C 423 nt-0.4□□□□□ -2.47
YRF1-4O13559 RDS3YPR094W 324 nt-0.4□□□□□ -2.47
YRF1-4O13559 tM(CAU)Q1tM(CAU)Q1 76 nt-0.41□□□□□ -2.47
YRF1-4O13559 JLP2YMR132C 627 nt-0.41□□□□□ -2.47
YRF1-4O13559 YER090C-AYER090C-A 90 nt-0.44□□□□□ -2.48
YRF1-4O13559 YJL150WYJL150W 303 nt-0.44□□□□□ -2.48
YRF1-4O13559 YNR077CYNR077C 255 nt-0.46□□□□□ -2.48
YRF1-4O13559 tD(GUC)QtD(GUC)Q 75 nt-0.48□□□□□ -2.49
YRF1-4O13559 YIL071W-AYIL071W-A 477 nt-0.5□□□□□ -2.49
YRF1-4O13559 YNL198CYNL198C 303 nt-0.52□□□□□ -2.49
YRF1-4O13559 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
YRF1-4O13559 tA(UGC)QtA(UGC)Q 76 nt-0.57□□□□□ -2.5
YRF1-4O13559 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
YRF1-4O13559 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
YRF1-4O13559 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
YRF1-4O13559 YNL266WYNL266W 420 nt-0.57□□□□□ -2.5
YRF1-4O13559 YLR286W-AYLR286W-A 135 nt-0.6□□□□□ -2.51
YRF1-4O13559 snR50snR50 90 nt-0.6□□□□□ -2.51
YRF1-4O13559 PAU9YBL108C-A 129 nt-0.63□□□□□ -2.51
YRF1-4O13559 YBR178WYBR178W 375 nt-0.64□□□□□ -2.51
YRF1-4O13559 YDL159C-BYDL159C-B 177 nt-0.65□□□□□ -2.51
YRF1-4O13559 snR161snR161 161 nt-0.66□□□□□ -2.51
YRF1-4O13559 snR33snR33 183 nt-0.7□□□□□ -2.52
YRF1-4O13559 YBL053WYBL053W 375 nt-0.7□□□□□ -2.52
YRF1-4O13559 YCR095W-AYCR095W-A 159 nt-0.72□□□□□ -2.53
YRF1-4O13559 YLR466C-BYLR466C-B 117 nt-0.72□□□□□ -2.53
YRF1-4O13559 snR67snR67 82 nt-0.73□□□□□ -2.53
YRF1-4O13559 YBR196C-AYBR196C-A 150 nt-0.73□□□□□ -2.53
YRF1-4O13559 SOM1YEL059C-A 225 nt-0.75□□□□□ -2.53
YRF1-4O13559 YLR299C-AYLR299C-A 93 nt-0.79□□□□□ -2.54
YRF1-4O13559 YGR151CYGR151C 336 nt-0.82□□□□□ -2.54
YRF1-4O13559 YNL337WYNL337W 255 nt-0.86□□□□□ -2.55
YRF1-4O13559 SKI7YOR076C 2244 nt-0.91□□□□□ -2.56
YRF1-4O13559 YBR223W-AYBR223W-A 120 nt-0.92□□□□□ -2.56
YRF1-4O13559 Q0032Q0032 291 nt-0.96□□□□□ -2.56
YRF1-4O13559 YNL338WYNL338W 159 nt-0.96□□□□□ -2.56
YRF1-4O13559 YGL007C-AYGL007C-A 87 nt-1.05□□□□□ -2.58
YRF1-4O13559 tP(UGG)QtP(UGG)Q 72 nt-1.05□□□□□ -2.58
YRF1-4O13559 YHR180C-BYHR180C-B 105 nt-1.07□□□□□ -2.58
YRF1-4O13559 YML054C-AYML054C-A 159 nt-1.08□□□□□ -2.58
YRF1-4O13559 YCL001W-BYCL001W-B 255 nt-1.08□□□□□ -2.58
YRF1-4O13559 YAL037C-AYAL037C-A 93 nt-1.29□□□□□ -2.62
YRF1-4O13559 YBL071C-BYBL071C-B 99 nt-1.29□□□□□ -2.62
YRF1-4O13559 YOL083C-AYOL083C-A 141 nt-1.29□□□□□ -2.62
YRF1-4O13559 tY(GUA)QtY(GUA)Q 84 nt-1.34□□□□□ -2.62
YRF1-4O13559 YOL164W-AYOL164W-A 183 nt-1.34□□□□□ -2.62
YRF1-4O13559 YBR296C-AYBR296C-A 120 nt-1.34□□□□□ -2.62
YRF1-4O13559 RPL41AYDL184C 78 nt-1.35□□□□□ -2.63
YRF1-4O13559 YBR109W-AYBR109W-A 225 nt-1.37□□□□□ -2.63
YRF1-4O13559 YOR376W-AYOR376W-A 156 nt-1.38□□□□□ -2.63
YRF1-4O13559 YOR225WYOR225W 330 nt-1.4□□□□□ -2.63
YRF1-4O13559 snR81snR81 201 nt-1.45□□□□□ -2.64
YRF1-4O13559 YLR294CYLR294C 330 nt-1.45□□□□□ -2.64
YRF1-4O13559 YKL106C-AYKL106C-A 120 nt-1.46□□□□□ -2.64
YRF1-4O13559 YBL100W-CYBL100W-C 120 nt-1.47□□□□□ -2.65
YRF1-4O13559 YGR240C-AYGR240C-A 201 nt-1.48□□□□□ -2.65
YRF1-4O13559 YOR316C-AYOR316C-A 210 nt-1.48□□□□□ -2.65
YRF1-4O13559 snR38snR38 95 nt-1.52□□□□□ -2.65
YRF1-4O13559 snR47snR47 99 nt-1.53□□□□□ -2.65
YRF1-4O13559 CDC65tQ(CUG)M 72 nt-1.55□□□□□ -2.66
YRF1-4O13559 snR77snR77 88 nt-1.56□□□□□ -2.66
YRF1-4O13559 YNL170WYNL170W 396 nt-1.62□□□□□ -2.67
YRF1-4O13559 snR61snR61 90 nt-1.64□□□□□ -2.67
YRF1-4O13559 YNL103W-AYNL103W-A 90 nt-1.67□□□□□ -2.68
YRF1-4O13559 YBR126W-BYBR126W-B 144 nt-1.68□□□□□ -2.68
YRF1-4O13559 YGL041C-BYGL041C-B 183 nt-1.71□□□□□ -2.68
YRF1-4O13559 YKL225WYKL225W 348 nt-1.81□□□□□ -2.7
YRF1-4O13559 YMR315W-AYMR315W-A 108 nt-1.81□□□□□ -2.7
YRF1-4O13559 ATP8Q0080 147 nt-1.82□□□□□ -2.7
YRF1-4O13559 tS(GCU)Q1tS(GCU)Q1 86 nt-1.82□□□□□ -2.7
YRF1-4O13559 YOR309CYOR309C 381 nt-1.88□□□□□ -2.71
YRF1-4O13559 snR62snR62 100 nt-1.91□□□□□ -2.72
YRF1-4O13559 YDR034C-AYDR034C-A 177 nt-1.93□□□□□ -2.72
YRF1-4O13559 YOL166W-AYOL166W-A 156 nt-2.03□□□□□ -2.73
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms