Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNA1AO00555 AC092068.2-201ENST00000590491 1708 ntBASIC18.95■□□□□ 0.62
CACNA1AO00555 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CACNA1AO00555 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNA1AO00555 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA1AO00555 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1AO00555 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1AO00555 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CACNA1AO00555 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1AO00555 MFAP1P1-201ENST00000442257 1255 ntBASIC18.95■□□□□ 0.62
CACNA1AO00555 YBX1P10-201ENST00000444752 975 ntBASIC18.95■□□□□ 0.62
CACNA1AO00555 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA1AO00555 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.95■□□□□ 0.62
CACNA1AO00555 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CACNA1AO00555 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CACNA1AO00555 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CACNA1AO00555 NUS1P1-201ENST00000446295 882 ntBASIC18.94■□□□□ 0.62
CACNA1AO00555 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CACNA1AO00555 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CACNA1AO00555 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CACNA1AO00555 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CACNA1AO00555 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CACNA1AO00555 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1AO00555 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA1AO00555 STARP1-201ENST00000397973 869 ntBASIC18.94■□□□□ 0.62
CACNA1AO00555 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA1AO00555 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CACNA1AO00555 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.93■□□□□ 0.62
CACNA1AO00555 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CACNA1AO00555 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1AO00555 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1AO00555 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.93■□□□□ 0.62
CACNA1AO00555 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CACNA1AO00555 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 AL590627.1-203ENST00000421194 1026 ntBASIC18.93■□□□□ 0.62
CACNA1AO00555 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.93■□□□□ 0.62
CACNA1AO00555 AC079776.4-201ENST00000511039 504 ntBASIC18.93■□□□□ 0.62
CACNA1AO00555 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.93■□□□□ 0.62
CACNA1AO00555 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 MIR564-202ENST00000385049 94 ntBASIC18.92■□□□□ 0.62
CACNA1AO00555 AL353719.1-201ENST00000566847 864 ntBASIC18.92■□□□□ 0.62
CACNA1AO00555 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1AO00555 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CACNA1AO00555 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA1AO00555 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 ANOS2P-203ENST00000472227 1816 ntBASIC18.92■□□□□ 0.62
CACNA1AO00555 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1AO00555 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CACNA1AO00555 AP000523.1-201ENST00000398242 1049 ntBASIC18.92■□□□□ 0.62
CACNA1AO00555 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.92■□□□□ 0.62
CACNA1AO00555 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1AO00555 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1AO00555 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.92■□□□□ 0.62
CACNA1AO00555 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 AC068473.5-201ENST00000616428 2072 ntBASIC18.91■□□□□ 0.62
CACNA1AO00555 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.91■□□□□ 0.62
CACNA1AO00555 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.91■□□□□ 0.62
CACNA1AO00555 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.91■□□□□ 0.62
CACNA1AO00555 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CACNA1AO00555 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms