Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.34■□□□□ 0.53
CDHR4A6H8M9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDHR4A6H8M9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 KRT16P6-202ENST00000425692 1426 ntBASIC18.33■□□□□ 0.53
CDHR4A6H8M9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDHR4A6H8M9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 MIR663A-201ENST00000385250 93 ntBASIC18.33■□□□□ 0.52
CDHR4A6H8M9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 AF201337.1-201ENST00000520239 748 ntBASIC18.33■□□□□ 0.52
CDHR4A6H8M9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 MKRN4P-201ENST00000444706 1521 ntBASIC18.33■□□□□ 0.52
CDHR4A6H8M9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDHR4A6H8M9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 HLA-G-202ENST00000376815 851 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 HLA-G-203ENST00000376818 1127 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 LSM12P1-201ENST00000411836 588 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 CROCCP5-201ENST00000436658 830 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 AC023632.3-201ENST00000521633 145 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 AC105036.2-201ENST00000569468 176 ntBASIC18.32■□□□□ 0.52
CDHR4A6H8M9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.32■□□□□ 0.52
CDHR4A6H8M9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDHR4A6H8M9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDHR4A6H8M9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms