Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC29.64■■■□□ 2.33
HFM1A2PYH4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
HFM1A2PYH4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
HFM1A2PYH4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
HFM1A2PYH4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC29.63■■■□□ 2.33
HFM1A2PYH4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 KRT16P5-201ENST00000455284 522 ntBASIC29.62■■■□□ 2.33
HFM1A2PYH4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 Z99916.2-201ENST00000604037 246 ntBASIC29.62■■■□□ 2.33
HFM1A2PYH4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HFM1A2PYH4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC29.62■■■□□ 2.33
HFM1A2PYH4 AC092667.1-201ENST00000434301 2586 ntBASIC29.61■■■□□ 2.33
HFM1A2PYH4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC29.61■■■□□ 2.33
HFM1A2PYH4 RPS2P4-201ENST00000476944 856 ntBASIC29.61■■■□□ 2.33
HFM1A2PYH4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
HFM1A2PYH4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
HFM1A2PYH4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC29.6■■■□□ 2.33
HFM1A2PYH4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
HFM1A2PYH4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
HFM1A2PYH4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HFM1A2PYH4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HFM1A2PYH4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 RPS2P55-201ENST00000397318 883 ntBASIC29.59■■■□□ 2.33
HFM1A2PYH4 AC107956.1-201ENST00000494359 873 ntBASIC29.59■■■□□ 2.33
HFM1A2PYH4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC29.59■■■□□ 2.33
HFM1A2PYH4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
HFM1A2PYH4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 YBX1P10-201ENST00000444752 975 ntBASIC29.58■■■□□ 2.33
HFM1A2PYH4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC29.58■■■□□ 2.33
HFM1A2PYH4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
HFM1A2PYH4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC29.57■■■□□ 2.32
HFM1A2PYH4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
HFM1A2PYH4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 AL157384.1-201ENST00000445995 2473 ntBASIC29.56■■■□□ 2.32
HFM1A2PYH4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
HFM1A2PYH4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HFM1A2PYH4 MIR718-201ENST00000390190 70 ntBASIC29.56■■■□□ 2.32
HFM1A2PYH4 C1QL1P1-201ENST00000568105 661 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms