Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Gm3839S4R1W1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm3839S4R1W1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3839S4R1W1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3839S4R1W1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3839S4R1W1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm3839S4R1W1 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.4■■□□□ 1.02
Gm3839S4R1W1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gm3839S4R1W1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm3839S4R1W1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3839S4R1W1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3839S4R1W1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3839S4R1W1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3839S4R1W1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Gm3839S4R1W1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3839S4R1W1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3839S4R1W1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3839S4R1W1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Gm3839S4R1W1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3839S4R1W1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3839S4R1W1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3839S4R1W1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3839S4R1W1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3839S4R1W1 Nkain2-201ENSMUST00000092602 558 ntBASIC21.34■■□□□ 1.01
Gm3839S4R1W1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Gm3839S4R1W1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3839S4R1W1 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.33■■□□□ 1.01
Gm3839S4R1W1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm3839S4R1W1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.32■■□□□ 1
Gm3839S4R1W1 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.32■■□□□ 1
Gm3839S4R1W1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm3839S4R1W1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3839S4R1W1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Gm3839S4R1W1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3839S4R1W1 Gm6821-201ENSMUST00000107540 542 ntBASIC21.3■■□□□ 1
Gm3839S4R1W1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm3839S4R1W1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3839S4R1W1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.29■■□□□ 1
Gm3839S4R1W1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3839S4R1W1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Gm3839S4R1W1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3839S4R1W1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3839S4R1W1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm3839S4R1W1 Gm8503-201ENSMUST00000118131 455 ntBASIC21.25■□□□□ 0.99
Gm3839S4R1W1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm3839S4R1W1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm3839S4R1W1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3839S4R1W1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.24■□□□□ 0.99
Gm3839S4R1W1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3839S4R1W1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Gm3839S4R1W1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3839S4R1W1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3839S4R1W1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3839S4R1W1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3839S4R1W1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3839S4R1W1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3839S4R1W1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3839S4R1W1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gm3839S4R1W1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.19■□□□□ 0.98
Gm3839S4R1W1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm3839S4R1W1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3839S4R1W1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3839S4R1W1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.18■□□□□ 0.98
Gm3839S4R1W1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3839S4R1W1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Gm3839S4R1W1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3839S4R1W1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.16■□□□□ 0.98
Gm3839S4R1W1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3839S4R1W1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3839S4R1W1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3839S4R1W1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3839S4R1W1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3839S4R1W1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.15■□□□□ 0.98
Gm3839S4R1W1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.15■□□□□ 0.98
Gm3839S4R1W1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3839S4R1W1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm3839S4R1W1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm3839S4R1W1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3839S4R1W1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm3839S4R1W1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3839S4R1W1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3839S4R1W1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3839S4R1W1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3839S4R1W1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.11■□□□□ 0.97
Gm3839S4R1W1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3839S4R1W1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3839S4R1W1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3839S4R1W1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3839S4R1W1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3839S4R1W1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3839S4R1W1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Gm3839S4R1W1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.09■□□□□ 0.97
Gm3839S4R1W1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.09■□□□□ 0.97
Gm3839S4R1W1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.08■□□□□ 0.97
Gm3839S4R1W1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms