Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01558Q9Y6Z2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC01558Q9Y6Z2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01558Q9Y6Z2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01558Q9Y6Z2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC01558Q9Y6Z2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC01558Q9Y6Z2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01558Q9Y6Z2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01558Q9Y6Z2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01558Q9Y6Z2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01558Q9Y6Z2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01558Q9Y6Z2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01558Q9Y6Z2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01558Q9Y6Z2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 ST7-AS1-201ENST00000456775 1889 ntBASIC13.7□□□□□ -0.22
LINC01558Q9Y6Z2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01558Q9Y6Z2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01558Q9Y6Z2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01558Q9Y6Z2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01558Q9Y6Z2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01558Q9Y6Z2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01558Q9Y6Z2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01558Q9Y6Z2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01558Q9Y6Z2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01558Q9Y6Z2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01558Q9Y6Z2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01558Q9Y6Z2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC01558Q9Y6Z2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01558Q9Y6Z2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01558Q9Y6Z2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01558Q9Y6Z2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01558Q9Y6Z2 AC120057.4-201ENST00000624722 1615 ntBASIC13.65□□□□□ -0.22
LINC01558Q9Y6Z2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01558Q9Y6Z2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01558Q9Y6Z2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC01558Q9Y6Z2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01558Q9Y6Z2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01558Q9Y6Z2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01558Q9Y6Z2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01558Q9Y6Z2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC01558Q9Y6Z2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 AC012676.1-201ENST00000574705 1949 ntBASIC13.62□□□□□ -0.23
LINC01558Q9Y6Z2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01558Q9Y6Z2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01558Q9Y6Z2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01558Q9Y6Z2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC01558Q9Y6Z2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01558Q9Y6Z2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01558Q9Y6Z2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01558Q9Y6Z2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01558Q9Y6Z2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01558Q9Y6Z2 AC020928.2-201ENST00000588717 2197 ntBASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 CLDN5-201ENST00000403084 2357 ntBASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01558Q9Y6Z2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01558Q9Y6Z2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms