Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ube4bQ9ES00 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ube4bQ9ES00 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ube4bQ9ES00 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Ube4bQ9ES00 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ube4bQ9ES00 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Ube4bQ9ES00 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.75■■□□□ 1.23
Ube4bQ9ES00 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ube4bQ9ES00 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ube4bQ9ES00 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Ube4bQ9ES00 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.74■■□□□ 1.23
Ube4bQ9ES00 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Ube4bQ9ES00 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ube4bQ9ES00 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ube4bQ9ES00 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ube4bQ9ES00 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ube4bQ9ES00 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ube4bQ9ES00 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ube4bQ9ES00 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ube4bQ9ES00 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.69■■□□□ 1.22
Ube4bQ9ES00 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.68■■□□□ 1.22
Ube4bQ9ES00 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ube4bQ9ES00 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ube4bQ9ES00 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ube4bQ9ES00 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4bQ9ES00 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Ube4bQ9ES00 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.65■■□□□ 1.22
Ube4bQ9ES00 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.65■■□□□ 1.22
Ube4bQ9ES00 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4bQ9ES00 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ube4bQ9ES00 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ube4bQ9ES00 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Ube4bQ9ES00 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Ube4bQ9ES00 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ube4bQ9ES00 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4bQ9ES00 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4bQ9ES00 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4bQ9ES00 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4bQ9ES00 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4bQ9ES00 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4bQ9ES00 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4bQ9ES00 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4bQ9ES00 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4bQ9ES00 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
Ube4bQ9ES00 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ube4bQ9ES00 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ube4bQ9ES00 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ube4bQ9ES00 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.58■■□□□ 1.21
Ube4bQ9ES00 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.58■■□□□ 1.2
Ube4bQ9ES00 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ube4bQ9ES00 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ube4bQ9ES00 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ube4bQ9ES00 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ube4bQ9ES00 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Ube4bQ9ES00 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Ube4bQ9ES00 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ube4bQ9ES00 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.54■■□□□ 1.2
Ube4bQ9ES00 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ube4bQ9ES00 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ube4bQ9ES00 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.54■■□□□ 1.2
Ube4bQ9ES00 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ube4bQ9ES00 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ube4bQ9ES00 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ube4bQ9ES00 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ube4bQ9ES00 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ube4bQ9ES00 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ube4bQ9ES00 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ube4bQ9ES00 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ube4bQ9ES00 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
Ube4bQ9ES00 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Ube4bQ9ES00 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ube4bQ9ES00 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ube4bQ9ES00 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.5■■□□□ 1.19
Ube4bQ9ES00 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ube4bQ9ES00 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ube4bQ9ES00 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ube4bQ9ES00 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ube4bQ9ES00 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ube4bQ9ES00 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ube4bQ9ES00 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4bQ9ES00 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4bQ9ES00 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ube4bQ9ES00 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Ube4bQ9ES00 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ube4bQ9ES00 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4bQ9ES00 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms