Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vps35Q9EQH3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Vps35Q9EQH3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vps35Q9EQH3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps35Q9EQH3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps35Q9EQH3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps35Q9EQH3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Vps35Q9EQH3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vps35Q9EQH3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vps35Q9EQH3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps35Q9EQH3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps35Q9EQH3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.83■■□□□ 1.41
Vps35Q9EQH3 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.83■■□□□ 1.41
Vps35Q9EQH3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps35Q9EQH3 Nkain2-201ENSMUST00000092602 558 ntBASIC23.8■■□□□ 1.4
Vps35Q9EQH3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps35Q9EQH3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vps35Q9EQH3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps35Q9EQH3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Vps35Q9EQH3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.78■■□□□ 1.4
Vps35Q9EQH3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Vps35Q9EQH3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.77■■□□□ 1.4
Vps35Q9EQH3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Vps35Q9EQH3 Gm6821-201ENSMUST00000107540 542 ntBASIC23.75■■□□□ 1.39
Vps35Q9EQH3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps35Q9EQH3 Gm8503-201ENSMUST00000118131 455 ntBASIC23.74■■□□□ 1.39
Vps35Q9EQH3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vps35Q9EQH3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps35Q9EQH3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps35Q9EQH3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.72■■□□□ 1.39
Vps35Q9EQH3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Vps35Q9EQH3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps35Q9EQH3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.71■■□□□ 1.39
Vps35Q9EQH3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps35Q9EQH3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.7■■□□□ 1.39
Vps35Q9EQH3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vps35Q9EQH3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
Vps35Q9EQH3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Vps35Q9EQH3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vps35Q9EQH3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.68■■□□□ 1.38
Vps35Q9EQH3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Vps35Q9EQH3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Vps35Q9EQH3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps35Q9EQH3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps35Q9EQH3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps35Q9EQH3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps35Q9EQH3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps35Q9EQH3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps35Q9EQH3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vps35Q9EQH3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Vps35Q9EQH3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Vps35Q9EQH3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Vps35Q9EQH3 Gm30023-201ENSMUST00000197970 889 ntBASIC23.63■■□□□ 1.37
Vps35Q9EQH3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.62■■□□□ 1.37
Vps35Q9EQH3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Vps35Q9EQH3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.62■■□□□ 1.37
Vps35Q9EQH3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.61■■□□□ 1.37
Vps35Q9EQH3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vps35Q9EQH3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps35Q9EQH3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vps35Q9EQH3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vps35Q9EQH3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps35Q9EQH3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps35Q9EQH3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Vps35Q9EQH3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps35Q9EQH3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps35Q9EQH3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Vps35Q9EQH3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vps35Q9EQH3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vps35Q9EQH3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Vps35Q9EQH3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Vps35Q9EQH3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Vps35Q9EQH3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps35Q9EQH3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps35Q9EQH3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.57■■□□□ 1.36
Vps35Q9EQH3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps35Q9EQH3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.56■■□□□ 1.36
Vps35Q9EQH3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Vps35Q9EQH3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Vps35Q9EQH3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vps35Q9EQH3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Vps35Q9EQH3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps35Q9EQH3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Vps35Q9EQH3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Vps35Q9EQH3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps35Q9EQH3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps35Q9EQH3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps35Q9EQH3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps35Q9EQH3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Vps35Q9EQH3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms