Protein–RNA interactions for Protein: Q9D3H9

5530401A14Rik, RIKEN cDNA 5530401A14 gene, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530401A14RikQ9D3H9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
5530401A14RikQ9D3H9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
5530401A14RikQ9D3H9 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.26■■□□□ 1.15
5530401A14RikQ9D3H9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
5530401A14RikQ9D3H9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
5530401A14RikQ9D3H9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
5530401A14RikQ9D3H9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.24■■□□□ 1.15
5530401A14RikQ9D3H9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
5530401A14RikQ9D3H9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.23■■□□□ 1.15
5530401A14RikQ9D3H9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
5530401A14RikQ9D3H9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
5530401A14RikQ9D3H9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
5530401A14RikQ9D3H9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
5530401A14RikQ9D3H9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
5530401A14RikQ9D3H9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
5530401A14RikQ9D3H9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
5530401A14RikQ9D3H9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
5530401A14RikQ9D3H9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
5530401A14RikQ9D3H9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.19■■□□□ 1.14
5530401A14RikQ9D3H9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
5530401A14RikQ9D3H9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.19■■□□□ 1.14
5530401A14RikQ9D3H9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
5530401A14RikQ9D3H9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
5530401A14RikQ9D3H9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
5530401A14RikQ9D3H9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
5530401A14RikQ9D3H9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.17■■□□□ 1.14
5530401A14RikQ9D3H9 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.17■■□□□ 1.14
5530401A14RikQ9D3H9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
5530401A14RikQ9D3H9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
5530401A14RikQ9D3H9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
5530401A14RikQ9D3H9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.15■■□□□ 1.14
5530401A14RikQ9D3H9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.15■■□□□ 1.14
5530401A14RikQ9D3H9 Gm9397-201ENSMUST00000200125 605 ntBASIC22.15■■□□□ 1.14
5530401A14RikQ9D3H9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
5530401A14RikQ9D3H9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
5530401A14RikQ9D3H9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
5530401A14RikQ9D3H9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.14■■□□□ 1.13
5530401A14RikQ9D3H9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
5530401A14RikQ9D3H9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
5530401A14RikQ9D3H9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
5530401A14RikQ9D3H9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
5530401A14RikQ9D3H9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.11■■□□□ 1.13
5530401A14RikQ9D3H9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
5530401A14RikQ9D3H9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
5530401A14RikQ9D3H9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
5530401A14RikQ9D3H9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
5530401A14RikQ9D3H9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
5530401A14RikQ9D3H9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
5530401A14RikQ9D3H9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
5530401A14RikQ9D3H9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
5530401A14RikQ9D3H9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.08■■□□□ 1.13
5530401A14RikQ9D3H9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
5530401A14RikQ9D3H9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.07■■□□□ 1.12
5530401A14RikQ9D3H9 Gm24970-201ENSMUST00000175582 82 ntBASIC22.07■■□□□ 1.12
5530401A14RikQ9D3H9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.07■■□□□ 1.12
5530401A14RikQ9D3H9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
5530401A14RikQ9D3H9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
5530401A14RikQ9D3H9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
5530401A14RikQ9D3H9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
5530401A14RikQ9D3H9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
5530401A14RikQ9D3H9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
5530401A14RikQ9D3H9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.02■■□□□ 1.12
5530401A14RikQ9D3H9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
5530401A14RikQ9D3H9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
5530401A14RikQ9D3H9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
5530401A14RikQ9D3H9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.01■■□□□ 1.11
5530401A14RikQ9D3H9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530401A14RikQ9D3H9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
5530401A14RikQ9D3H9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
5530401A14RikQ9D3H9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
5530401A14RikQ9D3H9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
5530401A14RikQ9D3H9 Tdp2-203ENSMUST00000223804 1136 ntBASIC22■■□□□ 1.11
5530401A14RikQ9D3H9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
5530401A14RikQ9D3H9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
5530401A14RikQ9D3H9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
5530401A14RikQ9D3H9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
5530401A14RikQ9D3H9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
5530401A14RikQ9D3H9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
5530401A14RikQ9D3H9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.96■■□□□ 1.11
5530401A14RikQ9D3H9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
5530401A14RikQ9D3H9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
5530401A14RikQ9D3H9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
5530401A14RikQ9D3H9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
5530401A14RikQ9D3H9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
5530401A14RikQ9D3H9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.93■■□□□ 1.1
5530401A14RikQ9D3H9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
5530401A14RikQ9D3H9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
5530401A14RikQ9D3H9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
5530401A14RikQ9D3H9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
5530401A14RikQ9D3H9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
5530401A14RikQ9D3H9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
5530401A14RikQ9D3H9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
5530401A14RikQ9D3H9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.9■■□□□ 1.1
5530401A14RikQ9D3H9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
5530401A14RikQ9D3H9 Gm30023-201ENSMUST00000197970 889 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms