Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Tmem42Q9CR22 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.87■□□□□ 0.93
Tmem42Q9CR22 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem42Q9CR22 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem42Q9CR22 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Tmem42Q9CR22 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tmem42Q9CR22 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tmem42Q9CR22 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tmem42Q9CR22 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tmem42Q9CR22 Zfp131-205ENSMUST00000223812 663 ntBASIC20.84■□□□□ 0.93
Tmem42Q9CR22 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tmem42Q9CR22 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem42Q9CR22 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tmem42Q9CR22 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tmem42Q9CR22 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.82■□□□□ 0.92
Tmem42Q9CR22 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tmem42Q9CR22 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tmem42Q9CR22 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.82■□□□□ 0.92
Tmem42Q9CR22 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem42Q9CR22 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.8■□□□□ 0.92
Tmem42Q9CR22 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.8■□□□□ 0.92
Tmem42Q9CR22 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem42Q9CR22 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem42Q9CR22 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Tmem42Q9CR22 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem42Q9CR22 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem42Q9CR22 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem42Q9CR22 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem42Q9CR22 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tmem42Q9CR22 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Tmem42Q9CR22 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem42Q9CR22 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem42Q9CR22 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem42Q9CR22 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem42Q9CR22 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Tmem42Q9CR22 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem42Q9CR22 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem42Q9CR22 Gm9397-201ENSMUST00000200125 605 ntBASIC20.74■□□□□ 0.91
Tmem42Q9CR22 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.74■□□□□ 0.91
Tmem42Q9CR22 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem42Q9CR22 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem42Q9CR22 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.72■□□□□ 0.91
Tmem42Q9CR22 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem42Q9CR22 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.71■□□□□ 0.91
Tmem42Q9CR22 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem42Q9CR22 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem42Q9CR22 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tmem42Q9CR22 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.7■□□□□ 0.9
Tmem42Q9CR22 Gm24970-201ENSMUST00000175582 82 ntBASIC20.7■□□□□ 0.9
Tmem42Q9CR22 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.7■□□□□ 0.9
Tmem42Q9CR22 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tmem42Q9CR22 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Tmem42Q9CR22 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem42Q9CR22 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.66■□□□□ 0.9
Tmem42Q9CR22 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem42Q9CR22 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem42Q9CR22 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Tmem42Q9CR22 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.64■□□□□ 0.89
Tmem42Q9CR22 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tmem42Q9CR22 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.63■□□□□ 0.89
Tmem42Q9CR22 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.63■□□□□ 0.89
Tmem42Q9CR22 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem42Q9CR22 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem42Q9CR22 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.61■□□□□ 0.89
Tmem42Q9CR22 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem42Q9CR22 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.6■□□□□ 0.89
Tmem42Q9CR22 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem42Q9CR22 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem42Q9CR22 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem42Q9CR22 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem42Q9CR22 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem42Q9CR22 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem42Q9CR22 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem42Q9CR22 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem42Q9CR22 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem42Q9CR22 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tmem42Q9CR22 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem42Q9CR22 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tmem42Q9CR22 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem42Q9CR22 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem42Q9CR22 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem42Q9CR22 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem42Q9CR22 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem42Q9CR22 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem42Q9CR22 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem42Q9CR22 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem42Q9CR22 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem42Q9CR22 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms